Cavenderia fasciculata (cellular slime mold): DFA_10662
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Entry
DFA_10662 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_10662
Enzymes [BR:
dfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DFA_10662
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFA_10662
Prokaryotic type
DFA_10662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Mlh1_C
Motif
Other DBs
NCBI-GeneID:
14866751
NCBI-ProteinID:
XP_004351305
UniProt:
F4QB17
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MFCKSTSIIINNHGCRQSSLLSSSMILKGFYSTSSTRNKSNKTPRPESHVEIKKHFKSIK
LQSPPNGLLVINKDAGYTSTDLTKVKVGHGGTLDLDADGVMVIGLGSGCKLLNRFLTSDK
KYFATCEFGRETTTCDRSGEFIDNGSSSFKKYDHLTLDMINQKLNEPEFRGSIEQIPPIY
SALRINGKRLSDLANQGVKVAPSARQVTIYDSKCTRLQGYQADYTMHVSSGFYVRSFVVD
VAKALDSTCYITRLRREQVGPFTLDHCLRLEDLFTLPQQHQLEQQQNTEIRDKLISERIQ
KHMKDMEILLNNYTKITNPSIKLSNSTIII
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtaagagtacgagtatcatcatcaacaatcatgggtgtagacaatcatcatta
ttatcatcatctatgatattaaaaggattctatagtactagtagtactcgaaacaagagt
aacaagacacccagaccagagagtcatgtagagatcaagaaacattttaaatcaattaaa
ttacaatcaccacctaatggtttattggttataaacaaagatgccggttatacaagtact
gatttaacaaaagtaaaggttggtcatggtggtactttggatttagatgccgatggagtt
atggtcattggtttgggaagtggttgtaaactattgaatcgattcttaacatctgacaag
aaatactttgctacttgtgagtttggtagagaaacaactacatgtgatagatctggagag
tttatagacaatggatcaagttcttttaaaaaatatgatcatttaacattggatatgatt
aatcaaaagttgaatgaaccagagtttagaggatcgattgaacaaataccaccaatatac
tcggcactacgaatcaatggaaagagattgagtgatctagccaaccaaggtgttaaagtg
gcaccatcggcacgacaagtaacaatatacgattcaaagtgtactcgattgcaaggttat
caagctgattatactatgcatgtaagctctggcttctatgtaagaagttttgtggttgat
gttgctaaagctttggattctacatgttacattacacgattacgtcgtgaacaagttgga
ccatttacattggatcattgtctaagattagaagatttatttacattaccacaacaacat
caactagaacaacaacaaaacacagaaatacgagataaattaatatctgaaagaattcaa
aaacacatgaaagatatggagatattactcaacaattatacaaagattacaaacccatca
attaaattatcaaactctaccatcatcatttaa
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