KEGG   Cavenderia fasciculata (cellular slime mold): DFA_10735
Entry
DFA_10735         CDS       T02668                                 
Symbol
vps18
Name
(RefSeq) 7-fold repeat in clathrin and VPS proteins repeat-containing protein
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04142  Lysosome biogenesis
dfa04145  Phagocytosis
dfa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    DFA_10735 (vps18)
   04142 Lysosome biogenesis
    DFA_10735 (vps18)
   04148 Efferocytosis
    DFA_10735 (vps18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dfa04131]
    DFA_10735 (vps18)
Membrane trafficking [BR:dfa04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    DFA_10735 (vps18)
   Hops complex
    DFA_10735 (vps18)
SSDB
Motif
Pfam: VPS18_solenoid_2nd VPS18_RING_C VPS18_solenoid_1st Clathrin zf-RING_Vps41 zf-RING_16 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-RING_UBOX zf_RING_Vps8_fungal zf-C3H2C3 zf-RING_11 zf-C3HC4 DUF2175 zf-ANAPC11 DpnI_C zf_RING_Vps8 DUF7944 zf-rbx1 zf-RING_15
Other DBs
NCBI-GeneID: 14866861
NCBI-ProteinID: XP_004351378
UniProt: F4QB90
LinkDB
Position
Unknown
AA seq 531 aa
MRRHSSMYASHLPTKSATRSERRKPNTTLTTKSTSWLPLSTARPNQTQCHQNTQQLVSTD
NNTQSPPQQSQQYLKAQNEFRQFLTNFKENLNQATSFHIISSHGAIDELLFYARLIEDYE
RVISYHIQHQQYETALNVLTQLKVSHQDLYYKFCPVLFHFIPYQTVNVWMQATFLNPRKL
IPSLMRYDHCKLPHGENQNQAIRYLEYCVKNLRNQDKAVHNYLLSLYVKQEDDGPLLKSL
SNEIYFDLKYALRLCMKEHKLKACVLIYSALGLYEEAVDLSLEVDIGLAKDNADRVKLDD
EALCKKLWLRIARHVVEKDNNIKEAMEFLKHCPLLKIEDILPFFPDFTVIDDFKEEICKS
LEDYNQYIEELKLEMDDATNSADLIRQDIQELRNKYGLIKGDQKCDICNYPALTKRFYLF
TCQHVFHSDCLISEIMKHLDNNSKQRVRELQMTLGAPVSPLPSQLAAMMNSSSMHLQMGG
GEEINPEDSTKNELDRIIAKECIYCGDLMIKSIEKPFIGDDEADLLTSWEI
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgagacggcactcgagtatgtacgcgagccatttgccaaccaaaagcgcgaccagatca
gagcgacgcaagccgaacactactttaacgacaaaaagtacgagttggctgccactttct
acggccagaccaaatcaaactcaatgccatcagaacacccaacaactcgtttcaaccgac
aataacactcaatcgcctccacaacaatcgcaacaatatctcaaggcacaaaacgaattt
agacaatttttaacaaactttaaggagaatttgaaccaagctaccagcttccacatcatt
tcgagtcacggagcaatcgatgaactcttgttctatgcccgtctcattgaagactatgaa
cgtgtcatctcgtaccacatccaacatcaacaatacgaaaccgccctcaacgtcctcact
caactcaaagtttcacatcaagacctttactataagttctgtcctgtattattccatttt
attccatatcaaaccgtaaatgtttggatgcaagctacctttttaaatccaagaaaactt
attccttctcttatgagatatgatcattgtaaattacctcatggtgaaaatcaaaatcaa
gcaattagatatttagaatattgtgtaaaaaatttaagaaatcaagataaagcagttcat
aattatttgttatcattatatgtaaaacaagaagatgatggacctttacttaaatcactt
tcaaatgaaatctattttgatttgaaatatgctcttcgtctatgtatgaaggaacacaag
ttaaaggcttgtgttttaatctatagtgcattgggattgtatgaagaagctgtagatctc
tcgttggaagtggatattggattggccaaggacaatgccgatcgtgtcaagttggatgat
gaagctctttgcaaaaagttgtggcttcgtattgcaagacacgttgttgaaaaggacaac
aacatcaaagaggctatggaattcctcaaacactgtccacttttaaaaatcgaagatatt
ctaccattcttccccgactttactgtcattgatgactttaaggaagagatttgtaaatca
ctagaagattataatcaatacattgaagaattgaaattggaaatggacgatgctacaaac
agtgcagatttgattcgtcaagatattcaagaacttcgtaacaaatatggtctcatcaag
ggtgatcaaaaatgtgatatttgtaattatcctgccctaacaaaaagattctatttgttt
acttgtcaacatgttttccattcagattgtttaatttcagaaattatgaaacatttagat
aataattcaaaacaaagagtaagagaattacaaatgacacttggagcaccagtttcacca
ttaccatcacaattggctgccatgatgaatagttcatcaatgcatttacaaatgggtggt
ggtgaagaaatcaatccagaagattctacaaagaatgaattggatcgtatcattgccaag
gaatgtatttattgtggtgatttaatgatcaaatcaatagagaaaccttttattggtgat
gatgaagctgatttacttacaagttgggaaatttaa

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