Cavenderia fasciculata (cellular slime mold): DFA_10834
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Entry
DFA_10834 CDS
T02668
Name
(RefSeq) RmlC-like cupin family protein
KO
K13174
THO complex subunit 5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_10834
09122 Translation
03013 Nucleocytoplasmic transport
DFA_10834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_10834
03041 Spliceosome [BR:
dfa03041
]
DFA_10834
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DFA_10834
Spliceosome [BR:
dfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DFA_10834
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
MAML1_3_TAD1
FHIPEP
Motif
Other DBs
NCBI-GeneID:
14866849
NCBI-ProteinID:
XP_004351476
UniProt:
F4QBI8
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MEVDGTVSDVLNNNRNILVDSRQEEEEETLSFYGFDELTDRIKSLCCEMLNAMINNTASA
AAGDNQKSSSAAADIINSNHQKMLSIFLEVKQSNRSIVFDMETWKTQVDKDKQKLDHLNL
FYENFIYEKNHLLKEIHSTSDFDISAFEPILVDEMYYNDKKQQDITAEQQSSSSSPELDE
ETQKHNQKMARLQFELDERIKKLDQLNKLNQKKKLHTEINISKQNFLSTLPKSLSSLSNK
LSQIGSSTSNYNPTAFYLSKPLYYMYSSILSYQSSCKKPDFNIKIIGDIDKASTFNQQQQ
QQQQQQQQQQQQQQQQQQQQQQIDQQPLTVHPLSLEFEYRISKELVSIQFYFLADENIIV
CSINTDNQSYLSNLFPNDIGDDFIQSFTTTNTNGPKQSNSTLNIVGKVFRWAQLLGGLMV
DSSMNRWSLVSVIMSSIEKRIHSKQKMFRQINELKKQVVKTNHSIDDLNFHLTLFESSYD
HSSFRLIFQNQNVEIQVDIIMVYDSVEIPPLFKLSSKVVKPPTKKDDEFNNPNRILLEKE
TLRSIELEMNQCNEFEEKTESALVLTNQIQKLKNILSILSNPKTLSSKLGLEGERLRRGK
LRFIPFSK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagatggaacagtatcagatgtattaaacaacaacagaaatattcttgttgac
agtcgacaagaagaagaagaagaaactttatcattctatggctttgatgagctaacagat
agaataaagtcactttgttgtgaaatgttgaatgctatgatcaataatacagcatcagca
gccgcaggagacaatcaaaagagcagcagtgctgctgctgacattatcaattcaaatcat
caaaagatgttgtcaatctttttagaagtaaaacaaagtaatagatctattgtatttgac
atggagacttggaagacacaagtagataaagacaaacaaaagttggatcatctcaaccta
ttctatgaaaactttatctatgaaaagaatcatctcttgaaagaaatacattccacctcg
gattttgatataagcgcttttgaacctatattggttgatgaaatgtattacaacgataaa
aaacaacaagatatcactgctgagcaacaatcatcatcatcatcaccagagttggatgaa
gaaacgcaaaaacacaatcagaaaatggctagacttcaatttgaactcgatgaaagaatt
aaaaagttggatcaattaaacaaattgaatcaaaaaaagaaactacatacagagattaat
atctctaaacaaaactttttatctactttaccaaaatccttatcgtcattgtcaaataaa
ttatctcaaattggatcatcaacttcaaattataatccaactgcattttatctttcaaaa
ccattatattatatgtatagttctatactctcctatcaatcatcttgtaaaaaaccagac
tttaatattaaaattattggtgatattgataaagcatcaacatttaatcaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaaattgatcaacaaccattaacagttcatccattatcactagagtttgaatatcgt
atatcaaaagaattggtatctatacaattctattttttggcagatgaaaatattattgtt
tgtagtataaacactgataatcaatcctatttatcaaaccttttcccaaatgacattgga
gatgattttattcaatcttttacgaccaccaacactaatggaccaaaacaatcaaatagt
acactaaatattgttggaaaggtttttaggtgggctcaattactgggtggtctcatggta
gactctagcatgaacagatggtccttggtttctgttatcatgtcttcaatcgagaaaaga
atacactctaaacaaaaaatgtttaggcaaattaatgaactcaagaaacaagttgttaaa
acaaatcattcaattgatgatctaaatttccatttgacattatttgaatcttcatatgat
cattcctcatttagattaatatttcaaaatcaaaatgtcgagattcaagttgatataata
atggtgtatgatagtgtagaaatacctcctttatttaaactatcatcaaaggtagttaaa
cctccaactaaaaaagatgacgaatttaataatccaaacagaatactattggaaaaagaa
acactaaggtcaatagaactggaaatgaaccaatgcaatgaatttgaagaaaaaacagaa
tctgctctcgtcctcaccaaccaaatacaaaagctaaagaatattttatccattttatca
aatccaaaaacattatcatcaaaactaggtcttgaaggagaaagattaagaagaggaaaa
cttcgttttattccatttagtaaataa
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