Cavenderia fasciculata (cellular slime mold): DFA_10990
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Entry
DFA_10990 CDS
T02668
Symbol
stip-1
Name
(RefSeq) D111/G-patch domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_10990 (stip-1)
Spliceosome [BR:
dfa03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DFA_10990 (stip-1)
Other components
Complex C specific factors
DFA_10990 (stip-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
Motif
Other DBs
NCBI-GeneID:
14866575
NCBI-ProteinID:
XP_004351238
UniProt:
F4QBZ2
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSFNDYNSDDDDDDGSGGGHGYYDKNGKIGGDNKRRYQRKQTKDDNIYGVFGNDYDDYDE
DGDKKMDNADDDGGGGGKQSSAANYNAQKPIYNPYKSSSTRFVPSGIYDPNTAMRSTDDQ
VDGSSSTTSTTTTTKKTKKKRNGSNVKKNKEERDRDKFDSMMGKNRNNNKYQQQQQQRDE
RPKDMQDVKVTGIGRKLLEKLGYKGTGDLRGDGTGIAEPIKAYSRPQGAGLSSSFKTDKQ
LQQKEQEQQDDEDEDDSDEDSEEEQVKATGWKKSDQTKTKAKYDIQEHIGKAKGGEDGGK
GSSSTSYIPQVIVDMTGPTTMVRTTDKQSKKDIHSMANISLDDQLGPMSQLKYNIGLLIR
MKGIDRQNINNKMKFENNRIESLTNSVSKLRLVIDSENAHRKKIETLKEILVNLQRQLDD
GKLTLSTLFKQFIEFQTTYKKEYIKLKLYNLEKDFLRPLLIKKIELWNIEKDQNYLVDEM
MRWRSIFDKTSLSIHGDDDNNGYDDDENDTRQKIMMNQGSDIYFILIRDLVLPVIKTFIR
TRWRVKENTSVVVSLIGHWTAALPEVILDNILEQSIFPRIKNEVMQWNPLTDPIPIDQWL
HPWIPFIKTDLESLYPQIRQTLISVLGGWDVADQSALALLSPWKGVFEGNSMDSLLNRSI
TPKFSKAFAAFQYDQVLVTSTTKLEDNENIYPIIEYFEEWYQLWSPQNMIHFLSKHFFPI
FIESFCKSLQPTNTTNITPSQLLNFYQYWRQQFKSNIMDQNQIKYYFNIILDLIEQYLDK
KEIKPKTNINILPTIINNNNNKQQQKQNNNNNNNNNKNVGSSMIEQLKNQINQNHSDGLL
RDSLEQLAKELGLLFIPSNMSTDSGNQIYKFGSVPIVLDKVGIRTCQH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacgattataatagtgatgacgatgatgacgatggtagtggtggtggtcac
ggatactatgacaagaatggaaagataggaggagacaacaagagaagatatcaaagaaag
caaacaaaagatgacaatatctatggtgtatttggtaatgactatgatgactatgatgaa
gatggtgataagaagatggataatgcagatgatgatggtggtggtggtggaaaacaatca
tcagctgcaaactataatgctcaaaagccaatctataatccttacaagtcatcatcgact
agattcgtaccaagcggtatatacgatccaaatactgcaatgagatcaaccgatgatcaa
gtagatggttcttcgtcgacaacatcaacaacaacaacaacaaagaaaacaaagaaaaaa
aggaatggatcaaatgttaaaaagaataaagaggaaagagatagagacaagtttgattca
atgatgggaaagaatagaaataacaacaaatatcaacaacaacaacaacaaagagatgaa
agaccaaaagatatgcaagatgttaaagttactggtattggtagaaagttgttggagaaa
cttgggtataaaggaacgggtgacttgagaggagacggtactggtatagccgaacccatc
aaagcatactctagaccacaaggtgctggtctatcttcatcattcaaaacagataaacaa
ttacaacaaaaagaacaagaacaacaagatgatgaagatgaagacgatagtgatgaagat
agtgaagaggagcaagttaaagcaactggttggaaaaagtcagatcaaacaaagacaaaa
gctaaatatgatattcaagaacatattggtaaagctaaaggaggagaagacggaggaaaa
ggatcatcatcaacatcatatataccacaagtaatcgttgatatgacaggaccaacaaca
atggttagaacaactgacaaacaatcaaaaaaagatatacattcaatggcaaacattagt
ttggatgatcaacttggaccaatgtcacaattaaaatataatattggtctgttgattaga
atgaagggtatagatagacaaaatataaacaacaagatgaaatttgaaaacaaccgaata
gaatcattgaccaacagtgtcagtaaactacgtttggtcattgattcggaaaatgcacat
agaaaaaaaatagaaacacttaaagagattctagtcaatcttcaacgtcaattggacgat
ggtaaattaactctttcaacactattcaaacaatttatagaatttcaaacaacctataaa
aaagaatatattaaattaaaattatataatcttgaaaaagatttccttagacctttgttg
attaaaaaaatagaattatggaatattgaaaaagatcaaaattatttggttgatgaaatg
atgagatggagatcaatatttgacaagacatcattatcaattcatggtgatgatgataat
aatggttacgatgatgatgaaaatgatacaagacaaaaaataatgatgaatcaaggaagt
gatatttactttatattgattagagatttggtgttgccagtgatcaagacttttattcga
acaagatggagagtcaaggaaaacacgtcggttgtagtgtcgctcatcggacattggaca
gcagcactgccagaggttatattggacaatattctagaacaatcgatattcccacgtatc
aagaatgaggtgatgcaatggaatccattaaccgacccgattccaatcgatcaatggctt
cacccttggatcccattcataaagactgacttggaatcactgtatccacaaatccgacaa
acattgatcagtgtattgggtggatgggatgttgccgatcaatctgcgcttgcccttctc
tcaccttggaaaggtgtgtttgaaggaaattcaatggactctttgttgaatcgatccatc
acaccaaagttctcaaaagcatttgcagcattccaatacgaccaagttttggtaacctcg
acgacgaagttggaagacaatgaaaatatctatccaatcattgaatattttgaagaatgg
tatcaactatggtcaccacaaaacatgattcatttcctatcaaaacatttcttcccaata
tttattgaatctttttgtaaatcacttcaaccaacaaatacaacaaatataacacctagt
caattattaaacttttatcaatattggagacaacaatttaaatcaaatattatggatcag
aatcaaatcaaatattactttaatatcatcctagatttaatcgaacaatacttggataaa
aaagaaattaaaccaaaaacaaatattaatattttacccactattataaataataataat
aacaaacaacaacagaaacaaaataataataataataataataataacaaaaatgttggt
tcatcaatgattgaacaattaaaaaatcaaattaaccaaaatcattcagatggattactt
agagattcattagaacaattggcaaaggagttgggattactattcattccatccaacatg
tcgacagattcaggtaatcaaatctataaatttggatcagttcccattgtattggataaa
gtcggcattagaacctgccaacattaa
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