Cavenderia fasciculata (cellular slime mold): DFA_11065
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Entry
DFA_11065 CDS
T02668
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosome protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_11065 (smc6)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
DFA_11065 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Occludin_ELL
ABC_tran
Ig_Dlec1_1
Motif
Other DBs
NCBI-GeneID:
14866328
NCBI-ProteinID:
XP_004350003
UniProt:
F4QEP3
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MVGKRKEVEEESDDDEIIVSQDIKRIKTQQQQQQQQQRRIVQQEEDSDEEFEDSQPQSSS
TTARATKAVHNGNGHSTNGNGHRTKSVDSSESEDEEMDEDEDGVAGESELGIIESISVEN
FMCHRHFEIKFGPNVNFISGENGSGKSALLVALIICLGAKSGTTNRGHKLADLVKNDANQ
AIITVKLRNKGPEAHLPEEFGPSIIIERKISRSGGGGYKLKDHTGKKVISTKFSDLAVIL
ELFNIQIENPMAILMQDTSREFLNTSRPQDKYNLFLTATQLDQMKKDYLFINDQIKGSEQ
ELDKKGIIIKEMEKKVEALSKEFKDLQAVVDLEQKVQHLKEQLAWSYVFGVEQTIVKKKA
ALAQIIQEKNNIQNETQGIGQQINAITNDMADKRKKIEELSSEISKKQEEKQQVEVQLLE
VAKEESRFVARSDDKRKRMNHLKQRRENQHRSIQEIKRKNEAQRRNQSKQSDVDRKRQQL
EELEKKSTIITQEISEIKTEGQKLQSIRQEKQMAVSNVQNQVSKLEKQLIQLKSALTDNL
RIYGDRFPTLVKKIQDNSRKFSVQPIGPLGTMIKINDERWSYAIESIIKRGLLGSFLVGS
YKDGNLLFEMAKSVGIHNLDYTVVKMNNVEPYKTAEHDRLDPSYHTVLRAIQCDNVIVRN
YLIDTRGLETYVLVNNVEEGKNIIYGQKPHIIREAYTPIADRIFGSRDSQKLTTGDSSGR
SQILRASVEQLVRELDGQIKGYRPQIDQCEREERDAAQKDSAFQQAFKQKDQEYQRLTRE
LYRVKTDLKTLEEQLVEPTDEPTDELEQGMETINKEMEEIQQELQSIEHDRQKFDDSKRP
FVEQMRQIDHEADKIQRIVGKLDNEIKNLSRSERDLRMKEGKVISNVGEYDKKKLHLEDE
LTNDQLLHQESMQKAQEFCDRVEVAANENPSTLSQKIQKTEELIRKESKGKRSRAEVHVH
FKECRDKLVEILRTRDEMTKFNNKLKIHLNFRQKNWVKFQRKISLRVSQYFNIFLSRKGY
SGKIDFDHEDKKLEVSVQLDKMRPSENVTGKGDTKSLSGGERSFSTVALLLSLWEAMECP
FRAMDEFDVFMDEVNRRISIELLLSKARQTPTRQFIFVTPLSLNSITPSPFIYIHRVRPP
QRGQRTITETLNS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggttggtaaaagaaaagaagtagaagaggaaagtgatgacgatgaaatcattgtttct
caagatataaagagaataaaaacacaacaacaacaacaacaacaacaacaaagaagaata
gttcaacaagaagaagattcagatgaagagtttgaagattcacaaccacaatcttcgtca
acaacagcaagagcaacaaaagcagtacataatggaaacggtcacagtaccaatggaaat
ggacataggacaaagagtgtagattcttcagaatcagaagatgaagagatggatgaagat
gaagatggagttgcaggtgaatcagagttgggtatcattgaaagtatatcggtagagaat
ttcatgtgtcatcgtcattttgaaataaagtttggtcccaatgttaactttatcagtgga
gaaaatggtagtggaaagagtgctctattggtggcattgatcatttgtttaggtgcaaag
tctggtaccactaatcgtggccataaattggctgatttggttaaaaatgatgcaaatcaa
gcaatcattacagtaaagttaagaaataagggaccagaagcacatttaccagaagaattt
ggaccatcgattattatagaaagaaagattagtagatctggtggtgggggttataaatta
aaggatcatacaggtaaaaaagtaatctctacaaagttttcagatctagctgtcattttg
gaattgttcaacattcaaattgaaaaccctatggccattttaatgcaagatacaagtaga
gaatttttaaatacttcaagacctcaagataaatataatttatttttaacagcaacacaa
ttagatcaaatgaaaaaagattatttatttataaatgatcaaatcaaaggatcagaacaa
gaattggataaaaaaggaatcattattaaagagatggaaaagaaagttgaagcattgagt
aaagagtttaaagatttacaagctgttgttgatttggaacaaaaggttcaacacttgaaa
gagcaattggcatggtcctatgtgtttggtgttgaacaaactattgtcaaaaaaaaggct
gcactcgcccaaatcattcaagaaaagaataatatccaaaatgaaacgcaaggtattggg
caacagatcaatgcaatcaccaatgacatggccgataaaagaaaaaagattgaagaactt
tcttcagagatttcaaaaaagcaagaagagaaacaacaggtcgaagttcaattattggaa
gttgcaaaagaggaaagtagatttgttgcaagatcagacgacaagagaaagcgtatgaat
catctcaaacaacgtagagaaaatcaacatcgatccattcaagaaatcaagagaaaaaat
gaagctcaacgtcgtaatcagagtaaacagagtgatgtcgatcgtaaacgtcaacaattg
gaggaattggaaaaaaaatcaaccatcatcacacaagagatatctgaaatcaagacagag
ggtcaaaaattgcaatcgatacgtcaagaaaagcaaatggcagtctccaatgtacaaaac
caagtcagcaagctcgaaaaacaattgatacaactcaagagtgcattgactgataacctt
cgtatctatggtgatagattccctactttggtaaagaaaattcaagataattctcgaaag
ttctctgtgcaacccattggaccactcggcacaatgatcaagatcaacgatgaaagatgg
tcatatgctatagagtcgatcattaaaagaggtctacttggtagttttttggttggaagt
tacaaagatggcaacctcctctttgaaatggccaagtcggttggtattcacaaccttgac
tacactgtcgtcaagatgaacaatgttgaaccctacaaaacagccgaacatgacagactc
gatccatcatatcataccgttctccgtgccattcaatgtgataatgtcattgttagaaat
tatctcatcgatacaagaggacttgaaacatatgttttggttaataatgtagaggaagga
aagaatatcatttatggtcaaaaaccacatattatcagggaggcctacaccccaatcgca
gatagaatctttggttctagagactctcaaaaattgactactggtgacagttctggtaga
tcacaaattcttcgtgccagtgtcgaacaattggtacgcgaactcgatggacaaatcaaa
ggatacagaccacaaatcgaccaatgtgaaagagaagaaagagatgccgctcaaaaggat
agtgcattccaacaggcattcaaacaaaaggatcaagaataccaaagattgactcgtgaa
ctctaccgtgtcaagactgatctcaaaacactcgaagaacaattggtagaaccaaccgac
gaaccaaccgatgaactcgaacagggtatggaaacgatcaacaaggaaatggaagagatc
caacaagagttacaatcaatcgaacatgatcgccaaaagtttgacgattctaaaagaccg
tttgtcgaacagatgcgtcaaattgatcatgaagccgataaaattcaaagaatcgttggt
aaactcgacaatgagatcaagaatctctctcgttcggagcgtgatcttcgtatgaaagaa
ggtaaagtcattagcaacgttggagaatatgacaagaaaaagttgcatttggaagacgaa
ctcacaaacgatcaacttctccaccaagaatctatgcaaaaggctcaggaattttgtgat
cgtgtcgaggttgcagcaaatgaaaacccttctacattgtctcaaaagattcaaaagaca
gaggaactcattagaaaagagagcaagggtaaaagaagtcgtgcagaggttcacgtccat
ttcaaggaatgtcgtgacaaactggtagagattttaagaacacgtgatgaaatgacaaaa
ttcaacaacaaactaaagattcatctcaactttcgtcaaaaaaattgggtcaagttccag
agaaagatctcacttcgtgtctctcaatactttaacatcttcctttcaagaaagggttac
tctggcaagatagattttgatcacgaggataaaaaactcgaggtcagtgtacaattggat
aaaatgcgtccatctgaaaatgtaacaggcaaaggtgacactaaatcactgtcgggtggt
gaacgttcattctctacggttgcccttctcttgtcactttgggaagctatggaatgtccc
tttagagctatggatgaatttgatgttttcatggatgaagtcaatagacgtatcagtatt
gaactccttctatcaaaagcaaggcaaactccaacaagacaatttatttttgtcactcct
ttatctttaaattcaattacaccaagtccatttatttatattcatagagttagacctcca
caaagaggtcaaagaacaatcactgaaactttaaatagttaa
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