KEGG   Cavenderia fasciculata (cellular slime mold): DFA_11070
Entry
DFA_11070         CDS       T02668                                 
Symbol
helE
Name
(RefSeq) DEAD-box RNA helicase
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_11070 (helE)
DNA repair and recombination proteins [BR:dfa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    DFA_11070 (helE)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 zf-RING_2 zf-C3HC4_3 zf-RING_6
Other DBs
NCBI-GeneID: 14866037
NCBI-ProteinID: XP_004350008
UniProt: F4QEP8
LinkDB
Position
Unknown
AA seq 1558 aa
MGDNGSQQQQQQQQHLYTFQQQQQQQQQFHQNETIYQQLQSQFYNNTNGLINQSSPRLAS
NFEQLYSPTTLQPSSLSPPPSSSSSSSSSTTQQSPLLISQLAQLSQQINSNSSSPSITSL
TSPTNNSLLPSSSYTLPSILINNSFGSLSTQSSSLFVSSSSSSTTTATTQHNTAIPLPLT
NNSHNEKEPTKRFKKSGSGTNIKHLSSSGSSVSLTSSSSQLFNDNQNNNINNNNTVVTGL
VISPPTRSINNNNNNNNISQTISPVLGCVVGGGGGVGGPTSPLSSPVLCDRPSIFGQEII
IESKKTQSFHFDHHNHHHHHHHQQQPTKITDPIIPTSYHQCSIPLSNSAGGGGVGVGVGV
GSYTPFETNNNNNLNNLYNELINIRTSNILSNNFNNNQNNQNSLENEKRFPVIDMSNSGS
TPFIPNISSSSSTLFQLSNSSSTISPFQSLQQQFNNLNHQILQQTSQDSLLYPPSTSVWA
SEYYSFLKKQPFPQQQSYSTDMFLGDYSFKELELFFPLYAKTPIRIALHEEEVIMMVQDN
GSDQMIASIHDAPSWLAILLEKRYITVKGEIDHLSNIAYCKIYNSQLVEKDLVSNKDHIL
VKSWCQMAIDIGINISIIENQQTNNNQNIHNNNNNQNNNIILNSSSSTTNIKLNTSFNNS
MDFINVSSPLNTSTNATMSNLDFLSSSRLLNPSSSTTSTGQQPNTLNRSSGGDVLNKSMD
SIFKQKIEDFLNNILTEEMDTPVGLKLQLRNYQKQALHWMNTRERAELSDPPTLADLDSM
RNDLTFVWGGLLCDDMGMGKTIEILSIILSNRYIPPSPPPPPLIVSDQQEQQQQKDLCLT
YQTKTTLIICPVSVLQQWYNEITSHTEPSLNVYIYHGPGRNRDTRFLSTFDVVISTYTTL
SAEYPDEQDDDTSSSTIISPSSFSLSPLMPPNSSSSLSPTIQQPQQQQPQQQTNTSPVSV
QKKRKRIKKQDQNGLLNVRWFRVVLDEAHTIKERLTRTSKAACALESQIRWCVTGTPIQN
KLDDLFSLIQFLRVEPYSNYYWWNQYIMKPSKNRDEKGFSRLRILLSKILLRRVKDQKLN
NQPILNLPDKVITVKEDEFGEEEQQIYKQLWNASKRKFINYYKNGTLMKNYAHILELLLR
LRQVCDHPSLIKNIMQKNLFDDDEQKSIIDDANHQLVLEMLKSENYILPTEIGEKLKTIF
GKDIEDQECILCMESLDNPCLTSCGHIFCHGCITKHFEENGSITDQNYLPPSINLKESML
MVPISPRIEQNNQQQNINNNNSLTTITTSTTTITTTNNNNNNNNNNNNNNNNNNNNNGTK
CPTCKQIIIQENLKSVSFKSTSQQNNFLESTSSSSSSSSSSSSTSSPSDNFILRSSYSLT
KMTTDNWKSSTKVDSLMSELDKVHRKDSDAKSLVFSQWTSMLDLIEIPLQQAGIGYVRLD
GKLAQKQREANIKKFKEEGSIKVFLISMKAGGLGLNLVVASHVFLLDPWWNPATEEQAID
RVYRIGQNKNVNVTRFVIKNSIEERILKLQQNKKNLAQDTLQMKKQIRIEELKMLFDE
NT seq 4677 nt   +upstreamnt  +downstreamnt
atgggtgataatggtagtcagcaacaacaacaacaacaacaacatctatacacttttcaa
caacaacaacaacaacaacaacagtttcatcaaaatgaaacaatatatcaacaactacaa
tctcaattctataataacacaaatggtttgatcaatcaatcaagtcctagacttgcaagt
aattttgagcaactttattctccaactactttgcaaccaagttcactttcaccgccacca
tcatcttcttcttcttcctcctcttcgacaacacaacagtcaccactattaatatcacaa
ctggctcagttgagtcaacaaatcaattctaattcatcatctccttcaatcacttcatta
acctctccaactaataattcattattgccatcatcgtcatacacgttgccatctatattg
attaataactcatttggtagtttatcaacgcaatcatcatctctatttgtatcatcttca
tcatcatcgacgacgacggcaacgacccaacataacacagccattcctctgcctttgaca
aataattctcataatgaaaaggaaccaactaaacgattcaaaaagagtggtagtggcact
aatatcaaacatctatcatctagtggtagttctgtctcattgacctcttcttcatctcaa
ctatttaatgataatcaaaataacaatattaataataataatactgtagtcactggtcta
gtgatatcacctccaacaagatcaattaataataataataataataataatatttcacaa
actatttcaccagttcttggatgtgttgttggtggtggcggtggtgttggtggaccaaca
tcacctttatcatctcctgtactatgtgatagaccatccatctttggacaagaaattatt
attgaatctaaaaagacacaatcttttcatttcgatcatcataatcatcatcatcaccat
catcatcaacaacaaccaacaaaaataactgatcccattattcctacttcttatcatcaa
tgttctattccactttcaaactctgctggtggtggtggagtaggagtaggagttggagtt
ggttcatatacaccatttgaaacaaataataataataatttaaataatttatacaatgaa
ttgattaatataaggacatcaaatattttatcaaacaactttaataataatcaaaataat
caaaatagtttagagaatgaaaaaaggtttccagttattgatatgagtaatagtggaagt
acaccatttattccaaatatttcttcatcttcatctactctatttcaactatccaattca
tcatcaaccatctcaccatttcaatctttacaacaacaatttaataatttaaatcaccaa
atattacaacaaacctctcaagattctcttttataccctccatcaacaagtgtatgggca
tctgaatactactcttttcttaaaaaacaaccatttccacaacaacagtcatattccact
gatatgtttcttggtgattattcatttaaagagttggaattgtttttcccattgtatgca
aaaacaccgatacgaatagcattacatgaagaagaggttataatgatggttcaagataat
ggtagtgatcaaatgattgcatcaatacatgatgcaccaagttggcttgccattctactc
gaaaaaagatatatcactgtaaaaggagagattgatcatctatcaaatattgcctattgt
aaaatttacaattctcaactagttgaaaaggatcttgtctcaaacaaagatcatatttta
gttaaatcttggtgtcaaatggcaattgatattggtattaatatttctataattgaaaat
caacaaactaataataatcaaaatattcataataataataataatcaaaataataatatt
atattaaattcatcatcgtcaacaacaaatataaaattaaatacatcatttaataatagt
atggattttataaatgtttcatcaccattgaatacatcaaccaatgcaacaatgagtaat
ctagattttttatcatcatcaagattacttaatccatcgtcatcaacaacatcaacaggt
caacaaccaaacacattgaatagatcgtctggtggcgatgtattaaacaaatcaatggat
tctatctttaaacaaaagattgaagactttttaaataatatattgaccgaagaaatggac
actcctgttggactcaaactacaactacgaaactaccaaaaacaggcgcttcattggatg
aatactagagagagagcagaattgtctgatccacccacgctggccgatctagactctatg
aggaatgaccttacatttgtttggggtggattactatgtgatgatatgggtatgggtaaa
acaattgaaattttatcaatcatcttatcaaataggtatattcctccttctcctcctcct
cctcctcttattgtttcagatcaacaagaacaacaacaacaaaaagatttatgtttgaca
tatcaaacaaagacaacattaattatatgtccagtatcagttttacaacaatggtacaat
gaaataacctcacatacagaaccatcattaaatgtttatatatatcatggacctggtcgt
aatagagatacaagattcctatcgacatttgatgttgtcatttcaacatacactactcta
tctgcagagtatccagatgaacaagatgacgacacttcatcgtctaccattatatcacca
tcaagtttttcactatcacctctaatgcctcccaattcatcatcatctttgtctcccacc
atccaacaaccgcaacaacaacaaccgcaacaacaaaccaatacgtctccagtttctgta
caaaagaaacgtaaaagaattaaaaaacaggatcaaaatggattattaaatgttagatgg
tttagagttgtattggatgaagctcatacaatcaaagaaagattgacacgtacctcaaaa
gcagcttgtgcacttgaaagtcaaattagatggtgtgttactggcacaccaatccaaaac
aaattggatgatcttttctcacttattcaattcctccgagttgaaccatattcaaattat
tattggtggaatcaatatattatgaaaccaagtaaaaatcgtgatgaaaagggtttttca
agattaagaatattattatcaaaaatattattaagaagagtaaaagatcaaaaattaaat
aatcaaccaattttgaatttaccagacaaggtaataacagtaaaggaagatgaatttggt
gaagaagaacaacaaatttataaacaactttggaatgcatcaaagagaaagtttataaac
tattataaaaatggaacactcatgaaaaactatgctcacattttagagttgctattgcgt
cttagacaagtttgtgatcatccatcgctcatcaaaaatattatgcaaaagaatctattt
gacgacgatgaacaaaagtcaatcatcgacgacgcaaatcatcaattggttttggaaatg
ttaaaatcggaaaactatatcctaccaacagaaattggtgagaaacttaaaacaatcttt
ggcaaggatattgaagatcaagaatgtatattgtgtatggaatcattagataatccttgt
ttaacctcctgtggtcatatattttgtcatggttgtataactaaacattttgaagaaaat
ggatcgataactgatcaaaactatttaccaccatcaattaatttaaaagaatcaatgctt
atggttccaatttcaccaagaattgaacaaaataatcaacaacaaaatattaataataat
aacagtttaacaactattacaacttcaactacgacaataacgacaacaaataataataat
aataataataataataataataataataataataataataataataataatggtacaaaa
tgtccaacatgcaaacaaataataatacaagagaatttaaaatcggtttcatttaaatca
acatctcaacaaaacaactttttagaatcaacttcttcttcctcttcttcatcttcatct
tcatcatctacatcatcaccatcagataattttatattaagatcatcatattcgctaaca
aaaatgacaacagataattggaagagtagtacaaaggtagattcattgatgagtgaattg
gataaagttcatagaaaagattcagatgccaaatcattggtattttcacaatggactagt
atgttggatctcatagagataccacttcaacaagcaggcattgggtatgtcagattggat
ggtaaattggcacaaaaacaaagagaagcaaatattaaaaaattcaaagaggaaggatcg
atcaaagtatttttgatatcgatgaaagctggaggacttggtcttaatctagtagttgcc
tctcatgtctttttattagatccttggtggaatcctgcaaccgaggaacaagcaatcgat
cgtgtctacagaatcggacaaaacaaaaatgtcaacgtcactcgatttgttattaaaaac
tctatcgaggaaagaatacttaaactacaacaaaacaaaaagaatttggctcaagatact
cttcaaatgaagaaacaaattagaattgaagaacttaaaatgttatttgatgaataa

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