Cavenderia fasciculata (cellular slime mold): DFA_11186
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Entry
DFA_11186 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K14317
nuclear pore complex protein Nup214
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DFA_11186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_11186
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DFA_11186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
14866234
NCBI-ProteinID:
XP_004350129
UniProt:
F4QFB8
LinkDB
All DBs
Position
Unknown
AA seq
2044 aa
AA seq
DB search
MGDMIELEPLDAPNIRFQDVRENVRCIDWCRGGVDDEQQHCKLSEDSSLLTVSNVYGYVF
VVNNKGSIVVLKVDTLLKSLLSTTNKPSKNGAVDISSSHNNKDLFVATIQAPLIPVNDKN
CKVTLSLSHDDLYLAVAFNKSLMIYSIVDIISNNKTQQPLVKIESSKFGDSNINTIEWKK
DGYQLLIVTQKNELYLHDKLDANNITHLKTSSPIVTACWNKGNTPDEIFLANVDGSVHVI
TQNNPSKTIRSIPKHPSIGDEFTTYYIKFINDFIVLNYHYYEDEESGYENNEIYIYESNL
SPIPQVYYPVAMPRGTLNTFHLDFIAEWKTACLLSNDGSGVELFNIVDKSWTPLNLNDDS
RSDISRERYPTGMSVVRCFNQSPTNVDGLNLKEPFTSPVPCVLILDTAWDINCFNLFNLD
IKSTPNLIQSPKPLPKVSAVVQSPPLSLFSNPATSGSPPVPTLFGGGSLISQTSPTTSST
KGSATTTLFGNGLTALPGTPTATTPTFMSLPTPTNIFGPPPSSTTNKTATITSSQPPTNI
FGTSSTINFATPPSSQSPIFGGSPPTTTTNFSVSQLNNTTSPPTPSSIFFGKPAAPAGTV
SAVTPPAIQPSNLFGSTTKQTTSAAVFDGGFKSLQTTPTANNNNNNNNTTTSPQNQNTSS
PINHNNTNSLQVQKPPGKKIAKSYEAAMGQGQGQGHSAMFKPIDTPSKQSNALTIVSPPK
QKQQKAPHQLSNKLQICIRRYKSSIVYTSQNELAKKIKQNIEAFEKLSSGVNKSVDATDK
IIDDVNSVADNGLYNYERIAKEVDVLADTLDEFKQSIEETSKQAQLTKASNFKSLALATD
LELLTDYVGRPDYQQMLLNRPLDPEIQEARERITKSYVSMSADIRRVEEHLEQTQRDATS
EFNTMTPSAFLSLVYHTIDNHNQVVTKQHDILSTLSNRLKKRTNVGQHSNLSSSSLYGRS
SIGGKSSCHNMGNGKISNDNVDKLREYFLQKMTLEEKERKEKEQQQRQFKQLNDRDSDDE
SVNQLDKQLSNIKITTNPIKTEAYQLLIKGLKEKKVHTIKPLYGIHKRYTRSEQIAPPSD
DLLLLESSSSNNKGNQRGEEFNLNITPYDAFESSKYSFNPASKRTPIHFEDEIYDDDEDE
YEEEEEEGEEEYEEDYEDEGEEYEEEGGEYEEEEEYQEGEEEYEDDQQGQEYDRSYNQPP
SKKSPASNNNIPSGMPIVSLPQPTTTQKSSPSPKTSPLNTASSSIPTFNTNSFGSGIGIG
GGANSQLDTGLFGQKSMLPSQPISSTPLFGKPVMGTTTISSTSPFSSSLTGATTTKPSST
PSIVFPATVATSSPIFGVKPPDATTETKPSLFGGATTAETKPPSLFGDKTASSFPSTLTD
TKPSTTTTTAAAATTTETKPPSLFGGATSPPSLFGGPTSSIFGVKPSDATATTTETKPSL
FGGATSPIFDVKPSDASATTTDTKPPSLFGATSPSTTTTTTAETKPPSSIFGGSSTAAPS
LFAPKPSSTEPKVEVSPKPDESKPDTKPDLVESKPKEETKKPEEPSKPSLFGTTTTTTLT
DSKPDTVPSLFGTTTANKEKEKESSPLTLSDLTSAISKTDALPSLSLNSDKPPVSTSAAT
ISFGDLGFGGSKPAATTTSATPSTTPFGLPPSTSSVASTSGPFGAAQPPASTPFGQQPPA
GVSIFGKPAATTTAAAAPSVGPFGQQPVAATPGPGIFGGQQQQPTTTSAFGNPTPTAAGT
SVFGSAFGQPSAAPAVGTASVFGQQQPPQTAGTSVFGGGGQPTSAFGSTSSAPFGQQQTG
AFGGSVFGAQSSSAASQGSVFGKPAPQPQSGSVFGSQTSTPSASFGSTSAFGSTSAFGGG
SQPTTQAGGVFGGQQQSSAPTSVFGGGGQQQQPSAFGGASAFGGQQQPSAFGQPSAAPST
SAFGSTSAFGSTSAFGQPSAAPTSAFGSTSAFGGGGQQQPSAFGQPSAAPTSAFGSTAPA
PAFGSSSVFGQQQPSAFGQSSAFGQQPQSGSVFGSSSKVFGSGAGASSTFANLVNLGDGY
RTRV
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatgattgaacttgaacctttagatgcaccaaacattcgatttcaagatgta
cgagagaatgttagatgtatcgattggtgtagaggaggtgtcgacgatgaacaacaacat
tgcaagttgagtgaagactcttcacttttaacagtatccaacgtatacggttacgtgttt
gtagtgaataataagggatcgattgtcgttctaaaagtagacactcttctcaaatcacta
ttatcaactacaaataaaccatcgaaaaatggagcagtagacatatcatcatctcataac
aacaaagatttatttgttgcaactatccaagcacctcttatcccagtcaatgacaagaat
tgcaaagttacattatcattgtcacacgatgacttgtatctagctgtagctttcaataaa
tcattaatgatttattcaattgtagatatcatttcaaataataaaacacaacaaccattg
gtcaagattgaatcgagtaaatttggagactcaaatataaatactatcgaatggaagaaa
gacggttatcaactattgatcgtcactcagaaaaatgaattgtatctccacgataaacta
gatgcaaataatatcactcatttgaaaacatcctctcctattgttactgcatgttggaac
aaaggaaatacaccagacgaaatatttttggcaaacgtcgatggcagtgtacacgtaatt
acacaaaataatccttctaaaacaattagatcaatccccaaacatccaagcattggtgat
gaatttacaacatattatattaaatttataaatgattttattgtattgaattatcattat
tatgaggatgaagaaagtggatatgaaaacaatgagatttatatttatgaaagtaaccta
tcaccaattccacaagtttattatccagttgcaatgccacgtggaactttaaatacattt
catttagattttattgctgaatggaaaactgcatgtttattatcaaatgatggatcagga
gttgaattatttaatattgttgataaaagttggacaccattaaatttaaatgatgatagt
cgatctgatatatctagagaacggtatcctacaggcatgtcagtagttagatgctttaat
caaagtccaaccaacgtagatggattgaatttaaaggaaccgtttacatctccagtacca
tgtgtattgatattggatactgcttgggatatcaattgttttaatctattcaatttggat
attaaatctacacccaatctaattcaatctccaaaaccactcccaaaagtatcagcagta
gttcagtcaccaccattatcattgtttagtaatccagctactagtgggtcaccaccagtg
ccaactttatttggtggtggtagtttaatttcacagacatcaccaacaacatcatcaaca
aaaggatcagcaacaaccactttatttggaaatggattaacagctttacctggcacacca
acagctactacaccaacctttatgagtttacctactccaaccaatatattcggaccacca
ccatcatccacaaccaacaagacggcgactatcacctcctctcagccaccaaccaacata
tttggaacatcatctacaatcaactttgcaactccaccatcttcacaatctccaatattt
ggcggttctcctcctactaccaccaccaacttcagtgtttcacaacttaataatacaacc
tcaccaccaacaccatcatctatatttttcggtaaacctgctgctcctgctggtactgtt
tctgcagttacacctccagctattcaaccatccaatttatttggttcaactaccaaacaa
actacttcagctgctgtttttgatggaggatttaaatctcttcaaactacacccacagcc
aataataataataataataataatactacgacttcaccacaaaatcaaaatacatcttca
ccaattaaccataacaataccaattcattacaagtacaaaaaccaccaggaaaaaagatt
gcaaaatcatatgaagcagcaatgggtcaaggtcaaggtcaaggtcattcagcaatgttt
aaaccaattgatactccatctaaacaatccaatgcattgacgattgtatcaccaccaaaa
caaaaacaacaaaaggctcctcaccaactatcaaacaagctgcaaatctgtattcgtcgt
tacaagtcatcgattgtatacacatcacaaaacgagttggccaaaaagataaaacaaaat
atagaggcgtttgaaaaactatcgagtggagtcaacaagtcggtcgatgctaccgacaag
attatcgacgacgtcaactcggtggccgataatggtctctacaactatgaacgtattgct
aaagaggtggatgtgttggctgacacactcgacgagtttaagcagtcgattgaagagacg
agcaagcaagcacaactcaccaaagcaagcaactttaagtcattggcattggcaactgat
ttggaattgctgactgattatgtcggacgtccagactaccaacaaatgctgctcaaccgt
ccactcgaccccgagatccaagaagcacgtgagcgtatcactaaatcatatgtttcaatg
tctgcagacatccgtcgtgtcgaagagcatttggaacagactcaaagagatgcaactagt
gaattcaacacaatgacaccatctgcctttttatcactcgtctatcataccattgataac
cataatcaagttgtcaccaaacaacatgatatcctatcaacactatcaaatagattaaag
aaacgtacaaatgttggacaacattcaaatctttcatcctcatcattgtatggacgtagt
agtattggtggaaagagtagttgtcataatatgggtaatggaaagatatcaaatgataat
gtagacaagttgagagaatactttttacaaaaaatgacattggaagaaaaggaaagaaag
gaaaaggaacaacaacaacgacaatttaaacaactaaatgatcgtgatagtgatgatgaa
tcagtcaatcagttggacaagcagttatcaaatatcaagattacaaccaacccaatcaag
actgaagcataccaacttttaatcaagggtttgaaagagaaaaaggttcatacgatcaaa
ccattgtatggtatccacaagagatacacaagatcagaacaaattgctccaccatcagat
gacttgttactactagagtcttcgtcatccaacaacaagggaaatcaacgtggtgaagag
tttaatttaaatattacaccttatgatgcattcgagtcatcaaaatattcattcaatcct
gcttcaaagagaactccaattcattttgaagatgaaatttatgatgatgatgaagatgaa
tatgaagaagaagaagaagaaggtgaagaagaatatgaggaagattatgaagatgaagga
gaggaatatgaagaagaaggaggagaatatgaagaggaagaagagtaccaagaaggagaa
gaagaatatgaagatgatcaacaaggtcaagaatatgatcgttcatataatcaaccacca
tctaagaaatcaccagcttctaataataacattccatctggaatgccaattgtttcactt
ccacaaccaacaacaacacaaaaatcaagtccatcacccaagacatcacctttaaatact
gcttctagttctataccaacatttaacacaaattcatttggttctggtattggaattggt
ggtggtgcaaatagtcaacttgatactggtttgtttggtcaaaagtcaatgctcccatct
caaccaatatcatctactccattgtttggtaagcctgtaatgggaaccaccactatttca
tctacatctccatttagttcttcgctcactggagctacaaccaccaaaccatcatccaca
ccatccattgtattccctgcaactgttgctacatcttcaccaatatttggtgttaaacca
cccgatgccaccacagaaacaaagccatcattatttggaggtgccactaccgcagagaca
aaaccaccatcattgtttggagataagacagccagttcattcccatctactttaactgat
actaaaccatccactaccaccaccacagccgccgccgctaccactacagagacaaaacca
ccatcattatttggaggtgcaacatcaccaccatcgttatttggaggacccacgtcatcc
atatttggtgttaaaccatccgatgccactgccaccaccacagaaacaaagccatcatta
tttggaggtgccacctcaccaattttcgatgttaaaccatctgatgcttctgccactact
acagatacaaaaccaccatcattgtttggagctacatccccatcaaccactaccaccacc
accgcagagactaaaccaccttcatcgatatttggaggttcatctacagctgctccatca
ttgtttgcaccaaaaccatcatctactgaaccaaaggttgaagtatcaccaaaaccagat
gaatcaaaaccagacaccaaaccagacctagttgaatcaaagccaaaggaagagacaaaa
aaaccagaagaaccatcaaaaccatcgctatttggaactactactactacaaccttgaca
gattcaaaaccagatacagtaccatcattatttggtaccactactgccaacaaggaaaag
gaaaaggaatcatcaccattaacattatcagacttgacatcagccatttcaaagactgat
gctcttccatcgttgagtcttaacagtgataaaccaccagtatctacatctgctgcaact
atttcatttggtgatcttggatttggtggatcaaagccagcagcaacaacaacatcagca
acaccatcaactacaccatttgggttaccaccatcaacttcttctgttgcaagtacgagc
ggaccatttggagctgcacaaccacccgcatcaacaccatttggacaacaacctccagct
ggtgtatcaatatttggtaagcctgctgcaaccaccacagctgctgctgcaccttcagta
ggtccatttggtcaacaaccagtggctgccaccccaggacctggtatatttggaggacaa
caacaacaaccaaccactactagtgcatttggaaatccaactccaactgctgctggcaca
agtgtatttggtagtgcatttggacaaccctctgctgcaccagcagtaggcacagcaagt
gtatttggacaacaacaaccaccacaaactgctggaactagtgtatttggaggtggtgga
caaccaaccagtgcatttggcagtacatcgagtgcaccatttggacaacaacaaactggt
gcttttggtggatcagtatttggagcacaatcatcatcagcagcctcacaaggaagtgta
tttggtaaacctgctccacaaccacagagtggatctgtgtttggcagtcagacatcaacc
ccatcagcatcatttggatcaacaagtgcatttgggtcaactagtgcatttggtggaggt
agtcaacccacaactcaagcaggcggtgtatttggaggacaacaacaatcctctgcacca
accagtgtatttggaggtggaggacaacaacaacaaccatccgcatttggaggtgccagt
gcatttggtggacaacaacaaccatcagcatttggacaaccctctgctgcaccatcgacc
agtgcatttggatcaacaagcgcatttggatcaacaagcgcatttggacaaccctctgct
gcaccaaccagcgcatttgggtcaactagtgcatttggtggtggtggacaacaacaacca
tcagcatttggacaaccctctgctgcaccaaccagtgcatttggatcaacagcaccagcc
cctgcatttggatcatccagtgtatttggacaacaacaaccatctgcatttggtcaatct
tctgcctttggacaacaaccacagagtggatctgtttttggaagttcctccaaagtattt
ggatctggtgcaggtgcaagttcaacctttgcaaatttagttaacttgggggatggatat
agaaccagagtttaa
DBGET
integrated database retrieval system
