Cavenderia fasciculata (cellular slime mold): DFA_11334
Help
Entry
DFA_11334 CDS
T02668
Symbol
wdr36
Name
(RefSeq) WD40 repeat-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_11334 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_11334 (wdr36)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DFA_11334 (wdr36)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Utp21
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
ASA1
Beta-prop_NOL10_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_ACSF4
DSE1_N
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
VPS11_N
Beta-prop_IFT122_2nd
choice_anch_I
Motif
Other DBs
NCBI-GeneID:
14866410
NCBI-ProteinID:
XP_004350277
UniProt:
F4QCD8
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MKEFDDSINSIRVLSIGYISSRFPFDVITKASEISFVVPIGNCFHLLGVDKLNTHYTSPT
QASKIKCVRAYGTKKFITNCKEKILIWENDTIVGQLEGHSAGVIDMLLMSHVLMTLSKNN
ELFIWDLNSGQRYSSLSGIESFGKVTTMLHPRGYYNKVLLGNKDGEMSIWNINTKKQVYR
FAGWGSPIVSMEQSPAQDIIAVGLEDGSVHLHDIRHDKSVTVFRQRGSVTSMSFRTDGVK
AHLATASRSGVVSIWDLDTRKLFYSFTAHSSTVARAYFLAGEPIMVTNGSDNAVRVWTFH
NIDIYKPLLLRERTGHDVPPHATQFFDTDGRAGTVISTSDKGPRMLSVNISHINVPFSHN
KIKLGEGNDHLLAANPANYRTMNCIATAHGSNLVLWSFVRMAVDGDKNIRLNARISALGM
SACGNSAYVGTTTGDLECYNVQSGTKRASVRIEPAGSVNGIVVDATGRYVVTCASNKHIN
IWSSTLKPIASFVLESPQTMLVQHLESGMFACAGEDGIVRVYDMETRELARKFNIGHYVV
DMTFNHDGRWLIVAARGDATVRIYDIPSGLMVDWFTTRSPVTSISFSPRGEFLATTHADE
LGVYLWSNQMHFGTILLSRPGETAPMLDLPTVQADGEKGADGVETHADINTAKEKDRTIA
TGDEDEKKQQELEDNKGVPQLDVQDVDHDTIPSAAYGDQDPASSQQIGRLVTMTTLPKSK
WETLLDLDLIKERNKPLNIAEKPKLAPFFITSTGGVNPTFLTPEQLKEKDQKEKENISTN
GKKKNAEQELNGWGDWATPGDDNDDDEQENGNDIAALSKVLGKFNPIKIVKSKFLQLLEA
GYKSKNKDYSNLLNLIKEMTPSAIDYEIRNVNHIEMDIHYMVDFLVQLMRGNNDFDLVQT
LTTHFLRVHGNLLMTSEYSSSLVELKQSQKSGWSHLQNVFQANICMLRYFTNTLQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatttgatgattcaatcaattcgattcgagtgttgtcgattggctatatctca
tcgagattcccattcgacgttatcaccaaagcatcagagatatcatttgtagtacctata
ggcaattgttttcatctattgggtgttgacaaattaaatacacattatacatcacctaca
caagcatctaaaatcaaatgtgtaagagcatatggaacaaagaaatttataaccaattgt
aaagaaaagatattgatttgggagaatgatacaattgttggacaattagaaggacattca
gcaggagtgattgatatgttattaatgtcacatgtattgatgacattgtcaaagaataat
gaattgtttatttgggatttaaatagtggacagagatatagtagtttgagtggcatcgag
tcgtttggaaaggtgactacaatgttgcacccacgtggatactataacaaggtgttgttg
ggtaacaaggatggagagatgtctatctggaatatcaacaccaagaagcaggtgtaccgt
tttgcaggttggggtagtcccatcgtgtcgatggagcagtcgcccgcacaagacattatc
gcggtcggtctagaggacggatccgtccacttgcacgacatccgtcacgacaagagcgtt
acagtgtttcgtcaacgtgggtcggtcacgtccatgtcgttccgtaccgacggcgtcaag
gcacacttggccacagcctcgcgttcaggtgtcgtctcgatctgggacttggacacgaga
aagttgttttactcgtttactgcacactcttcaaccgtggcacgcgcatactttttggct
ggcgagccaatcatggtgacgaacggctcggacaatgccgtgcgtgtttggacattccac
aacatcgatatctacaagccccttttgttgcgtgagcgtacgggccatgacgtgcccccc
cacgccacccagttctttgacacggacggtcgtgccggcacagtcatctccacgtcggac
aagggcccacgtatgctgtcggtcaacatctcgcacatcaacgtgccattctcgcacaac
aagatcaagctcggcgaaggcaacgaccacctcctcgccgccaacccggccaactaccgt
accatgaactgcatcgccacggcccacggcagcaacctcgtgttgtggagctttgtccgt
atggctgttgacggtgacaagaacatccgtctcaacgcccgtatctctgcactcggcatg
tctgcgtgcggtaactcggcctatgtcggcaccaccaccggcgacctcgaatgctacaac
gtgcagagtggcaccaagcgtgcatccgtccgcatcgaacctgctggcagcgtcaacggt
attgtcgtcgacgcgaccggtcgctacgtagtcacatgtgcatccaacaagcacatcaac
atttggagctcaaccttgaaaccaatcgcatcatttgtactcgagtcaccccaaaccatg
ctcgtgcaacacctcgagagtggtatgtttgcctgcgctggtgaagatggtattgtacgt
gtctacgacatggagacacgcgagttggcccgtaaattcaacattggtcactatgtcgtc
gacatgacctttaaccacgacggtcgttggttgattgttgctgcccgtggcgacgccact
gtccgtatctatgacattccatctggtttgatggtcgactggttcaccacccgctcaccc
gtcaccagtatctcttttagtccacgcggtgagttcctcgcgactacccatgccgacgaa
ctcggcgtctacctctggtccaaccaaatgcactttggcaccatcctcttgtcgcgacca
ggcgagactgcccccatgctcgacctgcccaccgtccaagccgacggcgaaaagggagct
gacggagtcgagacacacgccgacattaacactgccaaggaaaaggaccgaaccatcgcc
actggcgacgaagacgaaaagaagcaacaagaactcgaggacaataagggtgtcccacaa
ctagacgtgcaagatgtcgaccatgacactatcccatcggccgcctatggcgaccaagac
ccagcatcgtcacaacaaataggtcgactcgttaccatgaccacactccccaaatccaaa
tgggagacactcttggatttggacttgatcaaggagagaaacaaaccactaaacattgcc
gagaaaccaaagttggcaccattctttatcacatcgaccggtggtgtcaatccaactttc
ctcacacccgaacaattaaaagaaaaagatcaaaaagaaaaggaaaatatatcaacaaat
ggcaagaaaaagaatgctgaacaagaattgaatggttggggtgattgggctaccccaggt
gacgacaatgacgacgacgaacaagaaaatggaaatgatattgctgctcttagcaaagtt
ttgggtaaattcaatccaattaaaatagttaaatcaaagtttttacaacttttagaagct
ggttataaatcaaagaataaggattattcaaatttattaaatttaattaaagaaatgaca
ccatcagcaattgattatgaaattagaaatgttaatcatattgaaatggatattcattat
atggttgactttttggtacaattgatgagaggtaacaacgactttgatcttgtacaaacc
ttgaccactcatttcctacgtgtacatggtaatttattaatgacaagcgaatactcttca
tcactagtagaattaaaacaatctcaaaaatctggatggtctcatcttcaaaatgttttc
caagcaaatatttgcatgttgcgttattttacaaatactttacaataa
DBGET
integrated database retrieval system
