Cavenderia fasciculata (cellular slime mold): DFA_11543
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Entry
DFA_11543 CDS
T02668
Symbol
syn1A
Name
(RefSeq) t-SNARE family protein
KO
K08486
syntaxin 1B/2/3
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
DFA_11543 (syn1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_11543 (syn1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfa04147
]
DFA_11543 (syn1A)
Membrane trafficking [BR:
dfa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
DFA_11543 (syn1A)
Exosome [BR:
dfa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
DFA_11543 (syn1A)
Exosomal proteins of other body fluids (saliva and urine)
DFA_11543 (syn1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
OppC_N
DUF6345
Occludin_ELL
Syntaxin_2
Sfi1_C
Motif
Other DBs
NCBI-GeneID:
14865547
NCBI-ProteinID:
XP_004350490
UniProt:
F4QDI5
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MEDRLSELQAAGGVKLNDKKKKKGKGKGKVVDEESQTTSDNGNIEMEETGYIENEEGEGM
EEFMPEFYQEVGIVKTTMTSIRRSIKSIEEKYVQSLNSINVDQGTSIQKTLLYDINNNHY
NHYDISIEYEEDIQSMIDATNRSFSDLKKKLDSMKEGNDRYASVKTATPTEVRIRSNMHN
TLTQKFVEMMREYQEIQNNYKNKYKEKIERQYRIVKPDASEDEIRAAMDSGDSSKIFADT
ILYTHLHTQAKNALAYIQDRHNDIQRLERSIAELHQLFLDMAVLVEVQGEILNQIEANVE
STVLNTKEGVENLAEANRLHKKGRKKMYILLCIVVIVLAAVLAPVLATQIPKKSNN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcgtttatcagaactccaggcggctggaggagtcaaattaaatgataagaaa
aagaaaaaaggaaaaggaaaaggaaaggtagtagatgaggaatcacagaccacctctgac
aatggaaacattgagatggaagagactggatacattgaaaacgaagaaggcgagggaatg
gaagaatttatgccagaattttatcaagaggttggtatagttaaaacgacaatgacttcc
attcgaagaagcataaagagtatagaagagaaatacgtacaatctctaaattctataaat
gttgatcaaggaacgagtatacaaaagacattactgtatgatattaacaataatcattat
aatcattatgacatttcaatagaatacgaagaagatattcaatcaatgattgatgcaacc
aatagatcatttagcgatttgaagaaaaaattggattccatgaaagagggaaatgataga
tatgccagtgtaaagactgccacccctacagaagttcgtattcgatcaaacatgcacaac
acgcttacccaaaagtttgtagaaatgatgcgtgaatatcaagagattcaaaataactat
aaaaacaaatacaaggaaaagattgaaagacaatatagaattgtcaaaccagatgcatca
gaagatgaaattagagcagctatggattctggagattctagtaaaatctttgccgataca
attctttatacacatttgcatacacaggcaaagaatgcgttggcgtatattcaagatcga
cacaatgatatccaaagattggaaagatcgattgcagagttgcatcaactctttttggat
atggccgttcttgtagaggtacaaggtgaaattttaaatcaaatcgaggccaacgttgaa
tcgaccgttctcaacaccaaagagggtgtcgagaatctcgccgaggcaaatagactacac
aaaaagggaagaaagaaaatgtacattctattgtgtatcgttgtaattgtattagctgcc
gttttggctccagtattggccactcaaatcccaaagaaatcaaataattaa
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