Cavenderia fasciculata (cellular slime mold): DFA_11544
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Entry
DFA_11544 CDS
T02668
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFA_11544 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_11544 (gtf2b)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DFA_11544 (gtf2b)
Prokaryotic type
Archaeal type
TFB
DFA_11544 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
HTH_Tnp_ISL3
RB_B
HTH_23
Etd1
Motif
Other DBs
NCBI-GeneID:
14866259
NCBI-ProteinID:
XP_004350491
UniProt:
F4QDI6
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MNKPQTHTAAPPLPPGKKDALLNKVTCPVCKDPDPDVVEDYARGDLICRRCGCVIGDRIV
DEHSEWRTFSNSESTGADPNRVGGPNNPLLREGGLSTVIGKGTGKDASVLSRMQNRGALG
SGDRSLLAAFKEIEKMSDHIGLPQTVQDTAKELFRQMDDRKPMKGKSADGMLAASLYMAC
RIDGIARTFKEVCALSNNVSKKELAKCYKQMREALGDVHSLHAISTDDFMTRFCSNLSLP
NDVKKAADHVSRTAIDLGIVAGKNPLSVTAAAIYLVSQLSADKRTQKAISDVSGVSEVTI
RNVYKDLYSKRDSLLPPNSPFLQNVSDLPST
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccacaaacacatactgctgcaccaccattaccaccaggtaaaaaagatgca
ttattgaataaggttacatgtcctgtttgtaaggatccagaccctgatgtagttgaagat
tatgcacgtggagatttgatttgtagaagatgtggatgtgtcattggtgatcgtatcgta
gatgaacattcggaatggcgtacattctccaacagcgaaagcactggagctgaccctaac
cgtgtcggtgggccaaacaacccgctgttgcgtgagggtggtctctcgaccgtcattggc
aagggcacgggcaaggacgcttcagtgctgtctcgtatgcaaaacagaggtgcgttggga
agtggcgatcgttcgttgttggctgctttcaaagagattgaaaagatgtctgatcacatt
ggtctaccccaaaccgtccaagacacggccaaggagttgtttagacaaatggacgataga
aagccaatgaagggcaagtcggccgatggcatgttggccgcctccctctacatggcctgt
cgtatcgatggtattgcacgtacattcaaagaagtgtgtgcgctctccaacaacgtctct
aaaaaggagcttgccaaatgctacaaacaaatgagagaagcattgggtgacgtgcacagc
ttgcatgccatctcgacagacgatttcatgactagattctgttcgaatctttctcttcca
aacgatgttaaaaaggctgctgatcacgtctctcgtacagccattgatttgggcatcgtc
gccggtaaaaacccactctctgtcactgctgcagccatctacctcgtctctcaactctcg
gccgacaaaagaacacaaaaggccatatccgatgtcagtggtgtgtcagaggttaccatc
agaaacgtttacaaggatttatactctaaaagagattcactcttacctcccaattcacca
ttccttcaaaatgtttctgatttaccttcaacataa
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