Cavenderia fasciculata (cellular slime mold): DFA_11878
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Entry
DFA_11878 CDS
T02668
Symbol
vps20
Name
(RefSeq) SNF7 family protein
KO
K12195
charged multivesicular body protein 6
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03250
Viral life cycle - HIV-1
dfa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DFA_11878 (vps20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DFA_11878 (vps20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_11878 (vps20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfa04147
]
DFA_11878 (vps20)
Membrane trafficking [BR:
dfa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
DFA_11878 (vps20)
Exosome [BR:
dfa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DFA_11878 (vps20)
Exosomal proteins of other body fluids (saliva and urine)
DFA_11878 (vps20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Motif
Other DBs
NCBI-GeneID:
14866418
NCBI-ProteinID:
XP_004350822
UniProt:
F4QEK3
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MGVFYSFCGGEGRKGNGISNTDKAVLDLKVQRDKLKQYQVQINIVIQKEIEIAKECTKTK
KRNQALLALKKKKYQEKLLDDTNQNLINIQEMISKIELAEFQVKIFDSLKKGNTALNALQ
KEMSLEDVENLMAETEDAIAYQNEISAALAGQFSPEEEDSLLEELEAMEKQMTQFPKVPN
NKLDVNLDHIIPAVEQPTKQAVQIGGESSTSTTSTSKVEVEPEQLVNVEDIKPIDVDQDD
DIQEEEQEEEEEEEIEKVVKEKPKKQLEMAM
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggagtattttattcattttgtggaggggagggaagaaagggtaacggtatcagtaat
acagacaaggctgtattggatttaaaggttcaaagagacaagttaaaacaatatcaagtt
caaattaatatagtaatacaaaaagaaatagagatagctaaagaatgtacaaagacaaag
aagaggaatcaagcattattggcactaaagaagaaaaaataccaagagaaactgttggat
gataccaatcaaaatcttataaacattcaagagatgatatcaaagattgagttggcagag
ttccaagtcaagatattcgatagtctcaagaagggtaacacggcactcaacgcacttcaa
aaggaaatgtctctcgaagatgtagagaatctaatggcagagactgaagatgctattgcc
tatcaaaatgaaatatcagctgccctcgctggtcaattctcaccagaggaagaggattca
ctcttggaagaattggaagcaatggagaaacaaatgactcaatttccaaaagtaccaaac
aacaaattggatgtcaatctcgatcatattattccagctgtagaacaaccaactaaacaa
gcagttcaaattggtggtgaaagtagtactagtactactagtacgagtaaagttgaagtt
gaaccagaacaacttgtaaatgtagaagatattaaaccaattgatgttgatcaagatgac
gatattcaagaagaagaacaagaagaagaagaagaagaggaaattgaaaaagtagtaaaa
gaaaaaccaaagaaacaattggaaatggcaatgtaa
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