Cavenderia fasciculata (cellular slime mold): DFA_12029
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Entry
DFA_12029 CDS
T02668
Symbol
spt6
Name
(RefSeq) SH2 domain-containing protein
KO
K11292
transcription elongation factor SPT6
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_12029 (spt6)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_12029 (spt6)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DFA_12029 (spt6)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
DFA_12029 (spt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
HTH_44
SH2
HHH_9
Tex_central_region
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
14865805
NCBI-ProteinID:
XP_004350968
UniProt:
F4QFF8
LinkDB
All DBs
Position
Unknown
AA seq
1633 aa
AA seq
DB search
MNKNNYSDDEDDSHSVGEKDHHEESMSDKENRDQDMEEEEIGATKKRKTKKSDHHDMEAE
ESDAGSFRDSSEEDEDEDLDRYQYDDFVVDKDEESDEDGDHGDRKHGRKHEDPEERRRRK
EERRKRREEKKAAKDAGKLHRLKKMKVGDTGRDSIDDLLDEDDSGKIRDDRGYDGDIGEE
SEDEMDDFVVDSHNKPIHRSNRSSKNNRIYEGIFGDEDVSGDVPQKDALSLIKEQYEPSL
LEEKHFTDADEDIRKKNVPERLQTRKGTNYSGEKQTYEEAEWIYEMAYSSKDSRDLRQIE
TISSILKFIQRDLLEVPFIYTYKKDIFETYFTLQDLWNIYDLDEKWAHLVNSKRNLEGII
NNNPRLEHYLSSVRECKSEEGIADFYDLFQWVNGLDQNNINRNLLTNGEDFNPPPTQQPR
FKRAIKRDLYTIYAKAGLCEFLKYYGMSAQEFGINLMDNFMTNMPTDHSEDPSTAATQFI
CLEADTMEEVLKATRYLMAHDIGFDPNVRQSIRVIYRRYAYITTTPTPHGFKEIDAFHPY
ITVKNIREKPFLQFDDTQYLLILKAEKEGYIKTSIGIPSTVHINTILPEMDSLYLSDGTS
AISQQWNKERRSILADALTKFLYPLFDKEIRNKLLTEASNRVAFECAKSLEEKLRVAPWQ
PQNNSSSDDDDDEYESDDNNNRKRTFKIMSFCWGSGKIPTMAVVLDSEAEVVAHAKFDFL
CDRVGETMVQGKKQDDDARLHQMLKQHQPRLVLVSGTEMESRQLLDVVRDHVNRLTDDNA
LKKSVDVYFANPEIGLALQNNAKLTDEFKEYPAVLKHAIAVGRCALDPLTEYSNLCVGST
NDILYLKLNPLQDMIGKDYLLKLLHRCFINVVNAVGVDINKFIRHKFAAGPLQFVAGLGS
RKAQALLNSVIRRGGFISSRTTIEKLLNGQDVVYKNCIGFIQIREKYFDDYRDFNPLDDT
RIHPEDYTSAYKIAADALDKSVDFHEDSSVIEFVSEIMTKPNKLELIDLDAFADILESRN
NTQKKKVLYMIKNELTSPFADIRNYYHPPTYDQIFTWLTGETDETFKSGTLVSVSTIRNS
PEGVRCRLENGLEAVIPSDCISDTGDTKSFPRGTTLSCRVKSVDKERFNVTLSCKPSDMD
ISKWEDMIYHDLKMNGDNKYLNLDPTPPTALLTMTSLSGGNNGNSKALVERRPVPKKEAR
QKRNVVHPLWKSMNFMEAEKYLKDKPVGEAILRPSSRGHDHITVTFKFWDGIILHHDIKE
ADKPNAVSLGKSFYMGETKFDSLDEILARHVEYLINNLNDVKTHRYWKSGSKDEIDEFMR
KEKSKNPKHIPYRFGIAIERPGYIVLYHVPSNSPRHEYILVKPEGFEMRKKMYASLDELI
KHFKNNYAQLLQQQAAQQQHQQMSSLQRPPVNKPSPTSVANNNNNSLSAYKPPAQSSGWS
QQPQQPQQSYNNNNNNNNNYPSQQPPISSYNSRPPPSQQPQSGWPQPTNNYPPQQVYSDR
RDPFPGSQQPPQMPYQQQQQQQQPRYDNRDFRGQPPQMAPQQGYPSQQPQQQQQQPYRQP
PMPQQQQPGGWNQQPPQAPYSQFQPQQQQQPQMPYQQQQQQQTPFNQQQQQQQPYRQQPP
QQQPWDDHQSQWD
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaataactatagtgatgacgaagatgatagtcattctgtaggagaaaaagat
catcatgaagaatcaatgagtgataaggagaatagagaccaagatatggaggaagaggag
attggagcaacaaaaaagagaaagactaaaaagagtgatcaccatgacatggaggccgag
gaaagcgatgcaggtagctttcgcgacagcagtgaagaggacgaagatgaagatctcgat
cgataccaatacgatgatttcgtcgtagacaaggacgaagagtcagatgaagatggagat
catggagaccgtaaacatggtcgaaagcacgaagacccagaagagagaagacgcagaaaa
gaagaaagaagaaaaagaagagaagaaaagaaagctgccaaggatgctggcaaattacat
agattaaagaaaatgaaagttggtgatactggtagagattctatagatgatttacttgat
gaagatgattcaggaaagattagagatgatagaggatatgatggtgatattggagaagaa
tcagaagatgaaatggacgattttgttgtagattcacataacaaaccaatccacagaagt
aacagatcaagtaaaaataatagaatatatgaaggaatctttggagacgaagatgtatct
ggagatgttccacaaaaagatgcattgtcactcatcaaagaacaatacgaaccaagtctt
ttagaagaaaaacattttacagatgccgatgaagatattagaaagaaaaatgttcctgaa
agattacaaactcgaaaaggtacaaattattcaggagaaaaacaaacatatgaagaagca
gaatggatctatgagatggcatatagttcaaaggatagtagagacttgagacagattgaa
accatctcgagtatacttaaatttatccaacgtgatcttttagaggtaccctttatctac
acatacaaaaaggatatattcgagacatactttacactacaggatctttggaacatctat
gacctcgatgaaaagtgggcgcatcttgtcaactctaagcgcaacttggaaggtatcatc
aacaacaatccacgactcgaacactacctgtccagtgtcagagagtgcaagtcagaggag
ggtattgccgatttctacgatctcttccaatgggtcaatggattggaccaaaacaacatc
aaccgaaacctcttgaccaacggcgaggactttaacccaccccccacccaacagccacgt
ttcaagcgtgccatcaagagagatctgtacaccatctatgccaaggctggactctgcgag
tttctcaagtactatggtatgtcggcacaagagtttggcatcaatttgatggacaatttc
atgaccaatatgccaaccgatcactctgaggatccgtcgactgctgccactcagtttatc
tgtctcgaagcagacacgatggaagaggtgctcaaagcgacacgatatctcatggcacac
gacattggattcgatcccaatgtgcgtcagtcgatccgtgtcatttaccgtcgttatgca
tacatcaccacgacacccactccacatggattcaaagagattgacgcattccacccatac
atcactgtcaagaatatccgtgagaaaccattcctccaatttgacgacacacagtatttg
ttgattctcaaggccgagaaggaaggatatatcaagacgtcgattggcatcccctcgact
gtccacatcaacaccattctacctgaaatggattcgttgtacttgtcggatggaaccagc
gccatctcgcagcaatggaacaaggagcgtcgcagtatcttggctgacgcactcaccaag
ttcctctaccccctgtttgacaaggaaatccgtaacaagttgctcaccgaagcatccaac
cgtgttgcctttgagtgtgccaagtcactcgaggaaaagttgcgtgtcgcaccatggcag
ccacaaaacaactcgtcgtctgacgatgacgacgatgagtatgagtcagacgataacaac
aaccgtaagcgtacattcaagatcatgtcgttttgttggggaagtggaaagatccccacc
atggcagtcgtactcgactctgaagccgaagtggttgcacacgccaagtttgactttttg
tgtgaccgtgttggcgagactatggtacagggcaagaagcaagacgacgacgcccgtctc
caccagatgctcaagcaacaccaaccacgtctcgtgttggtatcgggcactgaaatggag
agtcgtcaactcctcgatgttgtacgtgaccatgtcaatcgtctaaccgacgacaatgca
ctcaaaaagtcggtcgacgtctactttgccaaccccgaaatcggtctggccctccaaaac
aatgctaaactcaccgatgaattcaaagagtatcctgctgtgctcaagcacgccatcgcc
gtcggtcgatgtgccttggatccattgacagagtactcgaacctctgcgttggctccacc
aacgatattctctatctcaagcttaatccacttcaagatatgattggaaaagactatctc
ttgaaacttcttcacagatgctttatcaatgtcgtcaatgccgtcggcgtcgacattaac
aagtttattcgtcacaaatttgcagctggacctctccagtttgttgcaggtctcggctct
agaaaggcccaagcccttttaaactctgtcattcgtcgtggcggtttcatctcttcaaga
acaactatcgaaaaattattaaatggtcaagatgttgtatataaaaattgtataggtttt
attcaaattagagaaaaatatttcgatgattatagagattttaatccacttgatgatact
agaattcatccagaagattatacttcggcttataagattgctgctgatgctcttgataaa
tcagttgatttccatgaagattcatctgttattgaatttgttagtgaaattatgacaaaa
ccaaacaaattggaattaattgatttggatgcatttgcagatattttagaaagtagaaat
aatacacaaaagaaaaaggtattatatatgatcaagaatgaattgacatcaccgtttgca
gatattagaaattattatcatccaccaacatatgatcaaatattcacttggttgactggt
gaaaccgatgaaacctttaaatcgggtacattggtatcagtgtctaccattcgtaactca
ccggaaggtgttagatgtagacttgaaaatggtttggaagcagtcatcccatcggactgt
atcagtgacactggagacaccaaatcgttcccacgtggcaccacgctctcgtgcagagtc
aaatctgtcgacaaggagagattcaatgtaacattatcctgcaagccatcagacatggac
attagcaagtgggaggacatgatctaccacgacctcaagatgaacggtgacaacaagtac
ctcaatctcgatccaacccctccaacggctctcttgaccatgacatcgttgtctggcggc
aacaacggcaactccaaggctctcgttgaaagaagaccagtgccaaagaaggaagccaga
caaaaacgtaatgtcgtccatccactctggaagtcgatgaactttatggaagcggaaaag
tatctcaaggacaagcctgtcggagaagctatcctccgtccaagcagtcgcggtcacgac
cacatcaccgtcacgttcaagttttgggatggcatcattctgcaccacgacatcaaggag
gccgacaagcccaatgccgtcagtcttggaaagtcgttctatatgggcgagaccaagttt
gacagtttggacgaaatcttggcgcgtcacgtcgagtatctcatcaacaacctcaacgac
gtcaagacacaccgctactggaagagcggctccaaggacgagatcgacgagtttatgcgc
aaggaaaagagcaagaatcccaagcacatcccctaccgctttggtattgccattgaacgt
cccggctacattgtgctctaccacgtaccatccaacagtccgcgtcacgaatacatcctc
gtcaagcccgaaggatttgaaatgcgtaaaaagatgtacgcctcgctcgacgagttgatc
aagcactttaaaaacaactatgctcaattgttgcaacaacaagcagctcaacaacaacac
caacaaatgtcttctttgcaacgtccacctgtcaacaaaccttctcctacttcagttgcc
aacaacaataacaactctttgtctgcgtacaaaccacccgctcaatcaagtggatggtct
caacaacctcaacaacctcaacaatcctacaacaacaacaacaacaacaacaacaactat
ccatcccaacaaccaccaatatcgtcgtacaacagcagaccaccaccatcacaacaacca
caaagtggatggccacaaccaaccaacaattacccacctcaacaagtctactcggacaga
agagacccattccctggatctcaacaaccaccacaaatgccctaccaacaacaacaacaa
caacagcaaccaagatacgacaacagagactttagaggacaaccacctcaaatggctcca
caacaaggatacccttcacagcaaccacaacaacaacaacaacaaccatacagacaacca
cctatgcctcaacaacaacaaccaggtggatggaatcaacaacccccacaagctccatac
agtcaattccagccacaacaacaacaacaaccacaaatgccataccaacaacaacaacaa
caacaaacaccttttaaccaacaacaacaacaacaacaaccatacagacaacaaccacct
caacaacaaccatgggatgatcatcaaagtcaatgggattaa
DBGET
integrated database retrieval system
