Cavenderia fasciculata (cellular slime mold): DFA_12037
Help
Entry
DFA_12037 CDS
T02668
Symbol
pcf11
Name
(RefSeq) ENTH domain-containing protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DFA_12037 (pcf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_12037 (pcf11)
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_12037 (pcf11)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DFA_12037 (pcf11)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DFA_12037 (pcf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
zf_PCFS4
Pcf11_C
Pfc11_Clp1_ID
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
14866106
NCBI-ProteinID:
XP_004350976
UniProt:
F4QFG6
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MMMINNNGNGTAASSSADTGGNEVVAAAAERTNADLAQEFQTRLFVLTFNDAIVINKLMH
FARDHIKAAQEIAPLVEERILESTNPKQRLAVLYVLDSITKNVGKIYQTLFAQNIVAVFC
STFEMVDDTIRTSLVNLYNTWVKGNVFDQASLKQMEDRFGADEFQRIAILRKQMLDAKKP
AQPRPTQQPTQPQQQPPQQHRHQQPKSNHHQQQSQQQPRQSQSPPSQTQQQLTPQQIQFQ
QQQQLLLQQNRLLQQLQQPPNVRPNQSFSNDPRVNKGSAPANPQNDFSQQQQDNGGFNQM
FNMMNQQPMNNNNNSSNNNNNNSLNYLNTFNNNNLMQMMMNMNRGGGGGGMNNNMMGMMN
NNNQPFNNMDNMNNNNFMGGNQHHQIGNQQLPPQLQNEHHSNNNNNNNHHNENNNHQQQQ
QQQQTVISQDHIQLASILEKIDQYLKLYNENEEFLRLQSDIKTNLYNRPYNQATFSQLKQ
QYSFLCQKYHVTSTEVTPATSKEDFDPADLLYRSLPLQCKHCALRFKEGDQLRKHIDWHY
RVNKKDKANKKDKEKAKQAMSRSWFITEDDWMNAQGGTHEHLPEQPALAYFSKSQQKEEQ
DKPLPDLISDDSQPNCPICREKFDKFWDEANEEWMYRAVEVSESLGKIVHCKCNRSTSPN
SDQEDDDEYESDYLKKRTIQDSVATDDNEAHLTSELADHKKSKLT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgattaacaacaatggtaatggaacagcagcatcatcctctgccgatacagga
gggaatgaggtagtggctgcagcagccgagagaacaaatgcagacctcgctcaagagttt
caaacaagactgtttgttttgacgttcaacgatgctatcgtcatcaacaaactaatgcat
tttgcaagagaccatattaaagctgctcaagaaatagctccacttgtagaagaaagaatt
ttagagagtacaaatcccaaacaaagattagctgttttatatgtattggattcaattaca
aagaatgttggaaagatatatcaaactttgtttgctcagaatatagtagctgtgttttgt
tcgacttttgagatggtcgacgacactattcgtacgtcattggtcaatttgtacaataca
tgggtcaagggaaacgtctttgatcaagcctctctcaagcaaatggaggatcgattcggt
gccgacgagttccaaagaattgcaatacttcgaaaacaaatgttagatgccaagaaacct
gctcaaccaagaccaacacaacaaccaactcaaccacaacaacaaccaccacaacaacac
cgtcatcaacaaccaaaatccaatcatcatcaacaacaatctcaacaacaaccaagacaa
tcacaatctccaccttcacaaacacaacaacaactaactccacaacaaattcaattccag
caacaacaacaattactactacaacaaaatcgtttacttcaacaattgcaacaaccacca
aatgtgagaccaaatcaatcgttttcaaatgatccaagggtaaacaaaggaagtgctcct
gccaaccctcaaaatgatttctctcaacaacaacaagataatggaggttttaatcaaatg
tttaatatgatgaatcaacaaccaatgaataataataataatagtagtaataacaataat
aataacagtctaaactatttaaatacatttaataataataatttaatgcaaatgatgatg
aatatgaatagaggaggaggaggaggaggtatgaataataatatgatgggtatgatgaat
aataacaaccaaccttttaataatatggataatatgaataataataattttatgggtggt
aaccaacatcatcaaatcggtaatcaacaattaccaccacaacttcaaaatgaacatcac
tctaataataataataataacaatcatcacaacgagaataataatcaccaacaacaacaa
caacaacaacaaacggtcattagtcaagatcacattcaattggcctccattttggaaaag
attgatcaatatctcaagctctacaatgaaaatgaagagtttttaagactccagagtgac
attaaaacaaatctctacaatcgtccctacaaccaagcgacattttcacaactcaagcaa
caatactcgttcctatgtcaaaagtaccatgtcacctctaccgaggttactccagccact
tcaaaagaggattttgatccagccgatttattatatcgatcattaccattacaatgtaaa
cactgtgcactaagattcaaggaaggtgatcagttgagaaagcatattgactggcattat
agagttaataaaaaagataaagcaaacaaaaaggacaaggaaaaggcaaaacaagcaatg
tcaagatcttggtttataactgaagacgattggatgaatgctcaaggtggaacacatgaa
catttaccagaacaacctgctcttgcctacttttctaaaagtcaacaaaaagaggaacaa
gacaaaccattgccagatttaatatcagacgacagccaaccaaattgtcccatttgtaga
gaaaagtttgataagttttgggacgaggcaaacgaggaatggatgtatcgtgccgttgaa
gtgagcgagtcacttggaaaaatcgttcattgtaaatgtaaccgatcaacatctccaaac
tcggaccaagaagatgacgacgaatatgaatcagattatctcaaaaagagaactattcaa
gactctgtagcaaccgatgacaatgaagcccatttaacatctgaactagctgaccataag
aaatccaagttgacctag
DBGET
integrated database retrieval system
