Cavenderia fasciculata (cellular slime mold): DFA_12103
Help
Entry
DFA_12103 CDS
T02668
Symbol
cdh1
Name
(RefSeq) WD40 repeat-containing protein
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DFA_12103 (cdh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dfa04121
]
DFA_12103 (cdh1)
Ubiquitin system [BR:
dfa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
DFA_12103 (cdh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
WDR55
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_WDR41
KNTC1_N
Beta-prop_Vps41
ELYS-bb
Beta-prop_VPS8
DUF4073
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
14866391
NCBI-ProteinID:
XP_004351042
UniProt:
F4QFT6
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MDQFIRSVGLGRLSNVYITFAFEQSSQSYRKMDRIYSLIIIFLICLKKRKRDKSTNRSFL
FQTKRTYHTMFHSEYESRLKSPSRSSPSKTKNMTPSSSLTPSSSSIYQDLIRENPPIAPP
NFYSCIQDPSSNNNNNNNQEEDENTNYNNNNNNNNNNNNNNNNNNNVKLISKQSIHFANE
DTYGDRFIPVPVGTESHCKFSTIDCNSPRKGGGDKLSLNQQQQRSNNHINHINNNNTNNN
INNNNNTNHLLNGQSNNNNTGGLLNGNGSNGSYNNGGLNNPRDERTFAYNLILKNEILGS
HSSPLLSMDQSSAIRSFDPFSTNNILHTLSSSVATSSSSSSSLLSVNSVSLTSPTSHSAS
TTAPIISSPSPLLINSCLLSPSSMQQQQQEPSILQFKSKSRASSSACLDVHSPYSLSPLS
GNSQKLLSSPRKPQRKISKVPFKVLDAPAISDDFYLNLVDWSSQNVLAVGLEKSVYLWNA
VNSQVSKLCDFSQDDNVTSVSWIERGTHLAVGGNDGIVQIWDVTKKKKIRELQGHSARVN
TMAWNSHLLSTGSKDRSILHHDVRDSSNYVCKLLGHRNEICGLKWSPDGQQLASGGNDNL
LCVWDHSMNQSSYLNNNNNNNNNNNYNYSSSSNNNSNYSNNNQNNNSSSFSSPSSSNSIC
NKPLYQFKFHNAAVKAIAWSPHQRGLLASGGGTHDKCIRFWNTGTGASLQSIDTGSQVCN
LAWSKNVNELVSTHGYSQNQITVWSYPSMTPVTTLIGHTSRVLYLAVSPDGTSIVTGAGD
QTLRFWNLFPSSKESSVFYNSPNSLDTLYKSELGIIR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcattcgttctgtaggattgggtcgtttgtccaatgtctatattacattt
gcattcgaacaatcatcccaatcctacagaaaaatggatagaatctactcattaataatt
atctttttaatttgtttaaagaaaagaaaaagagataagagtacaaatagatcattttta
ttccaaacaaaaagaacatatcatacaatgtttcattcagagtatgaatcgagactaaag
tctccttctagatcatcaccttccaagacaaagaatatgactccctcttcttccttgacc
ccttcctcttcctcgatataccaagacctcattcgagaaaaccctcccatagctccccca
aacttttattcttgtattcaagatccatcatctaataacaataacaataacaaccaagaa
gaagatgaaaatacaaactataataataataataataataataataataataataataat
aataataataataataatgttaaactcattagtaaacaatctattcattttgccaatgaa
gatacttatggcgatcgttttattccggttccggttggcaccgaatcgcattgtaaattt
tcaaccatcgattgcaattcacctcgaaaaggaggtggagataaactatcattgaaccaa
caacaacaacgtagtaacaaccatattaatcatatcaacaacaacaacaccaacaataat
atcaataacaataataatactaatcatcttttaaatggacaatcaaacaataacaatact
ggtggattattaaatggtaatggttcaaatggtagttataataatggtggtttaaacaat
ccaagagatgaaagaacctttgcatacaatcttattttaaagaatgagatattgggatca
cactcttctccattgctatcaatggatcaatcatctgccatacgttcatttgacccattt
tccacaaataatatccttcataccctctcttcatccgtcgcaacctcctcctcatcctcc
tcctcattgttgtctgtaaatagcgtatccctcacctcacccacctctcactctgcctct
accactgcacccatcatatcttcaccgtcgccgttgttgatcaacagctgtctcttgtct
ccatcatcaatgcaacaacaacaacaagagccatctatcctacaattcaaatcaaagagt
cgtgctagtagtagtgcgtgtttggatgttcactcaccctactctttgtctccactcagt
ggcaactctcaaaagttattgtcgtctccgcgcaaacctcaacgcaagatctccaaagtg
ccattcaaggtactggatgcacccgctatttcagacgacttttacctcaaccttgtcgac
tggagcagccaaaacgtgctcgctgtcggccttgaaaagagtgtctatttgtggaacgca
gtcaacagccaagtatccaagttgtgcgacttttcacaagatgacaatgtcacctcggtc
agttggatcgagcgcggtacacacctggctgtcggcggcaacgacggtattgttcaaatc
tgggacgtgaccaaaaagaaaaagatccgcgagctccaaggccactcggcacgtgtcaac
acgatggcctggaacagccacctcctctccaccggctccaaagaccgctccatcctccac
cacgacgttcgtgacagttccaactatgtctgcaagctactcggccaccgcaacgagatt
tgcggtctcaaatggtccccagatggccaacaacttgcaagtggtggaaatgataatcta
ctatgtgtttgggatcattcaatgaatcaatcatcttatttaaataataataacaataat
aataacaataataattataactatagtagtagtagtaataataatagtaattatagtaat
aataatcaaaataataatagtagtagtttttcatcgccatcatcatcaaactcaatttgt
aacaaaccattgtatcaatttaaatttcacaatgcagcagtcaaggctattgcatggtca
ccacatcaaagaggattattggcatcgggtggtggaacacatgataagtgtattcgcttc
tggaatactggtacgggtgcatcgttgcagtcaattgacacgggttcgcaggtatgcaac
ttggcgtggtccaaaaacgtcaatgaactcgtcagcacacacggatactcgcaaaaccaa
atcactgtgtggtcgtaccccagcatgacccctgtcactactcttattggccatactagt
cgtgtattgtatcttgccgtgtcccccgacggcacctcgatcgtcactggcgccggcgac
caaaccctccgtttttggaatcttttcccaagttcaaaagaaagttccgtcttttacaac
tctccaaattctctagacaccctttataaatcagagttgggaatcattagataa
DBGET
integrated database retrieval system
