Cavenderia fasciculata (cellular slime mold): DFA_12312
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Entry
DFA_12312 CDS
T02668
Symbol
lysS
Name
(RefSeq) lysine-tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DFA_12312 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dfa01007
]
DFA_12312 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_12312 (lysS)
Enzymes [BR:
dfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DFA_12312 (lysS)
Amino acid related enzymes [BR:
dfa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DFA_12312 (lysS)
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DFA_12312 (lysS)
Prokaryotic type
Other AARSs
DFA_12312 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
14865712
NCBI-ProteinID:
XP_004353975
UniProt:
F4QD65
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MPPKPAAKQDAEEDFDPSLYLENRTKQLNELQTTGFNPWPHKFEVTRSNPEFKKEFEHLT
VEDKCETVVTIAGRVKNKRAAGNALFFYDVDNNGVSLQLLVNKKEYTSVEEFTKINSILR
RGDIIGAKGKPGRSKTGELSLFVSEMFLLSPCLHMLPRVALTDQETRFRQRYLDMIINDN
VKRNFVIRSKVIQGVRRYLDNLGFVEVETPMLNMIAGGAAAKPFKTHHNALSKDMFMRIA
PELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNPEFTTCEFYMAYVDYNDLMTMTEDMLS
GIVRDIHGTNKLKYHPKGTDSEPIEIDFSTPWRRIDMIPELEKCLDAKIPTPYNSEECRL
FLIEQCKKHNVDCSPPQTTARLLDKLVGEFLESQCTNPAFIINHPEIMSPLSKYHRTIPG
LTERFELFINQREACNAYTELNNPFVQIERFEEQAKAKAMGDDEAQLIDTVFTTSLQYGL
PPTGGWGLGVDRFVMLLSDTYNIKEVILFPAMK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaagccagccgccaagcaagatgctgaagaggatttcgatccatcattatat
ttggagaatcgtaccaagcaattgaacgaattacaaaccactggattcaatccatggcca
cacaagtttgaagtgacccgttcaaacccagagtttaagaaggagtttgaacacttgacc
gtcgaggacaagtgcgagactgttgtcaccattgccggtcgtgtcaagaacaagagagct
gccggtaacgctttgttcttttacgacgttgacaacaatggcgtatcattgcaattgttg
gtcaacaagaaggaatacacctcggtcgaagagtttaccaagatcaactcgatcctccgt
cgtggagatatcattggtgccaagggcaagcccggtcgttccaagactggcgaactctca
ttgtttgtgtcagagatgttcctcctctcgccatgtctccacatgttgccacgtgtcgct
ctcaccgaccaagagacccgtttccgtcaacgttacctcgacatgatcatcaacgacaat
gtcaagcgtaactttgtcatccgttccaaggtcatccaaggtgtgcgtcgttatctcgac
aacctcggtttcgtcgaggtcgagacccccatgctcaacatgattgccggaggtgccgcc
gccaagcccttcaagacccaccacaacgccctctccaaggacatgtttatgcgtattgcc
ccagagctctacctcaagcaattggtcgtcggaggtatggaccgtgtctacgaaatcgga
aagcagttccgtaacgaagacattgatcacacccacaacccagagttcaccacctgcgag
ttttacatggcctatgtcgactacaacgacctcatgaccatgaccgaagacatgctcagc
ggtattgtccgtgacattcacggcaccaacaagctcaagtaccatccaaagggtaccgac
tcggaaccaatcgagattgatttctccaccccatggagacgtatcgatatgattcccgaa
ctcgaaaagtgtctcgacgccaagatcccaaccccctacaactctgaagagtgtcgtctc
ttcctcatcgagcaatgcaagaagcacaacgtcgactgctcgccaccacaaaccaccgcc
cgtctcctcgacaagctcgtcggtgagttcctcgagagccaatgcaccaacccagccttt
atcatcaaccatccagaaatcatgtcgccactctccaagtaccatcgtaccatcccaggt
ttgaccgaacgtttcgaattgtttatcaaccaacgtgaagcttgcaatgcctacactgaa
ctcaacaatccatttgtccaaatcgaacgtttcgaagaacaagccaaggcaaaggctatg
ggtgacgatgaagctcaactcatcgacactgtctttaccacctctcttcaatatggtctc
ccaccaactggtggttggggtctcggtgttgatagattcgtcatgttactctctgatact
tataacatcaaggaagttatccttttccctgctatgaagtaa
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