Deinococcus ficus: DFI_00295
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Entry
DFI_00295 CDS
T05674
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dfc
Deinococcus ficus
Pathway
dfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFI_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_00295
Enzymes [BR:
dfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DFI_00295
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DFI_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
Zn_ribbon_PriA
PriA_3primeBD
Zn_ribbon_6
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ASN81912
UniProt:
A0A221SZ40
LinkDB
All DBs
Position
complement(64209..66692)
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AA seq
827 aa
AA seq
DB search
MPLPIPAYEFTAPHGWTAAGPGGAVPLGCRVLVPWRGELVTALVVAPGSARGGHRLREAV
HVLDDPACPWVSPATVRAVTAWAADARIPAGLVWGDLLACGWEPAYAHRVRAVTDADLSS
FARRPPGPGWTDAGGFPAALLDAIREQGLLEEEFTAVPRLRSVVQARALDEVPPAARTVS
VLRAADPLPPGLTPKQRQACVWLAEHGPQDTLSGWAKAAGVSAGVVSGAVQAGGAAHVPE
PAPPPPAWTWLQERGPVDSLSAWASGASGDGHALSPTQAGTLVMRGWADVAQRPALAPDL
PAPAAAVTAGDPDRLPEAPVWRLHGGRPGARFRALAPRVQRLLAQGRSVLVVAPDHRTLR
RAWDALSGLAAAAGTGAAQLCGPLSDVQRLHTWEQVRTGEVRLVVGSSLALCAPLADLAL
LVVLEEGSDAHKLQSGSRAFVPDLAARVAAEHEAALALVGAVPAVESIPHPGAVLPPARV
RLHVVDYANPPQQPELGPLSGVHLTPGDLGYPLSHDLVRLLRQVQERGRQAALLAPRRGY
SALLRCPSCEHTPQCRHCDVPLRFHQESRQLTCHQCGYREVLPDRCDHCGERMWRARGPG
TEWIEQEVRRLLPGLPVYRVDRDRQDDLSPLYAGESGVMVGTQLLLSQEAPPNLALIGVT
LADTWLNVSDFRASERYHRLLRQLTEWHVEKPPMLVVQTFQADHPALRVLADGRDALAYP
AAEERVRKELGYPPHARLAQVELTAREAKRAQVAAQELADALHGAGATAQEVLGPAPSPV
ARLRGVYPYHLLLRARSDARLGELLRVLDSRTWKARLRVDVNPRSGL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
ctgccccttccgattcccgcgtacgagttcaccgccccccacggctggacggccgccggt
ccgggcggggcggtgccgctgggctgccgggtgctggtgccctggcgcggcgaactggtc
acggcgctggtggtggcgcccggctcggcgcggggcgggcaccggctgcgggaggcggtg
cacgtgctggacgacccggcctgcccgtgggtgagtccggcgacggtgcgggcggtgacg
gcctgggcggcggacgcgcgcatcccggcggggctggtgtggggggacctgctggcgtgc
gggtgggagccggcgtacgcgcaccgggtgagggcggtgacggacgcggacctgagcagt
ttcgcgcgccggccgccggggccgggctggacggacgccggggggttcccggccgcgctg
ctggacgccatccgcgagcaggggctgctggaggaggagttcacggccgtgccgcggctg
cgcagcgtggtgcaggcccgcgcgctggacgaggtgccgccggccgcgcggacggtgagc
gtgctgcgggccgccgacccgctgccgccgggcctgaccccgaagcagaggcaggcatgt
gtgtggctggccgagcacggcccgcaggacaccctgagcggctgggcgaaggcggccggg
gtgagcgcgggcgtggtgagcggcgcggtgcaggcgggcggcgcggcgcacgtcccggaa
cccgccccgccccccccagcctggacgtggttgcaggagcgcggcccggtggactcgctg
agtgcctgggcgagcggcgcgtccggagacgggcacgcgctgagccccacgcaggcgggc
acgctggtcatgcgcggctgggcggacgtggcgcagcggccggccctggcgccggacctg
ccggcgcccgccgcggcggtgacggccggggacccggaccgcctgccggaggcgccggtg
tggcggctgcacgggggtcggccgggggcgcggttccgggcgctggcgccgcgcgtgcag
cggctgctggcgcagggccgcagcgtgctggtggttgccccggaccaccggacgctgcgc
cgcgcctgggacgccctgagcggcctggccgcggcggccgggacgggcgcggcgcagctg
tgcgggccgctctcggacgtgcagcgcctgcacacctgggagcaggtccgcaccggggag
gtgcggctggtggtcggcagttcgctggcgctgtgcgcgccactggcggacctggcgctg
ctggtggtgctggaggaaggcagcgacgcgcacaagttgcagagcggctcacgggccttc
gtgccggacttggccgcgcgggtcgccgcggagcacgaggcggcgctggcgctggtgggc
gcggttccggcggtggagagcatcccgcatccgggtgcggtgctgccgccggcccgggtg
cggctgcacgtggtggattacgccaacccgccgcagcagccggagttggggccgctgagc
ggcgtgcacctcacgcccggcgacctggggtatccgctgagtcacgatctggtgcggctg
ctgcggcaggtgcaggagcgcgggcggcaggccgcgctcctggcgccgcggcgggggtac
tcggcgctgctgcgctgccccagctgcgagcacaccccgcagtgccggcactgcgacgtg
ccgctgcggtttcaccaggagtcccggcagctgacctgccaccagtgcgggtaccgggag
gtgctgccggaccgctgcgaccactgtggggagcggatgtggcgcgcccgcggcccgggc
accgagtggatcgagcaggaggtcaggcgcctgctgccggggctgccggtgtaccgcgtg
gaccgggaccggcaggacgacctgagtccgctgtacgccggggagagcggggtgatggtg
ggcacgcagctgctgctgtcgcaggaggcgccgccgaacctcgcgctgatcggggtgacg
ctggcggacacctggctgaacgtgtcggatttccgcgccagtgagcgctaccaccgcctg
ctgcggcagctgaccgagtggcacgtggagaagccgccgatgctggtggtgcagaccttc
caggcggatcacccggccctgcgggtgctggccgacggccgggacgccctggcctacccg
gccgcggaggagcgcgtccggaaggagctcgggtacccgccgcacgcccgcctcgcgcag
gtggaactcacggcccgggaggcgaaacgggcgcaggtggccgcgcaggagcttgccgac
gcgctgcacggggcgggcgcgacggcgcaggaggtgctgggtccggcgcccagcccggtg
gcgcggctcaggggcgtgtacccgtaccacctgctgctgcgtgcccgcagcgacgcgcgg
ctgggcgagctgctgcgggtgctggattcccgcacgtggaaagcccggctgcgggtggac
gtgaacccccgctccgggctgtga
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