Deinococcus ficus: DFI_01280
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Entry
DFI_01280 CDS
T05674
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dfc
Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfc03016
]
DFI_01280
Enzymes [BR:
dfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DFI_01280
Transfer RNA biogenesis [BR:
dfc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DFI_01280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Sec66
Motif
Other DBs
NCBI-ProteinID:
ASN81929
UniProt:
A0A221SZ53
LinkDB
All DBs
Position
268492..269877
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AA seq
461 aa
AA seq
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MTVTPELTPAQRTEVELLARGKQEKSRTLRDLKLPETPEAAHALLLRLGVWTEAHTPYAD
RLQAALSPVALPVPAFPDEARLDLTHLPGFAIDDEGNRDPDDAVAVEALAGGLTRLWVHV
ADVSALVPPDSPLDQEARARGATLYLPDRTVGMLPDALVEQAGLGLHDVTPALSVSLDLD
AEGNAEAVDVQLTRVRVQRLTYSQAQAQLDAGQEPFVTLARLARASRQLRESEGALSIDL
PEVRVKADEHGASVTPLPKPEMRQVVQECMTLAGWGAAIFADDNEIPLPFATQDHPTREV
RGDTLSAQWARRKTLARTRFQPSPGPHHGMGLDLYAQVTSPMRRYLDLVVHQQLRAFLAG
GEPMPGKVMASHIAQAQLNADGTRQAERLSRRHHTLRFVAAQPDRVWDAVVVDRRGPQAT
LLIPDLAFDVPMSTPAAPGTALRVQLTDVNLPALSVRVRAV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacgcccgaactcacgcccgcgcagcgcaccgaggtggaactgctcgcccgc
ggcaaacaggaaaaaagccgcaccctgcgcgacctgaaactcccggaaaccccggaggcc
gcccacgccctgctgctgcgcctgggcgtctggaccgaggcgcacaccccgtacgccgac
cggctgcaggccgccctgagccccgttgccctgcccgtgcccgccttcccggacgaagcg
cgcctggacctgacgcacctgccgggcttcgccatcgacgacgagggcaaccgcgacccg
gacgacgccgtggccgtcgaggccctggcaggcggcctgaccaggctgtgggtgcacgtc
gcggacgtctcggcgctggtgccgccggacagcccgctggaccaggaggcccgcgcgcgc
ggcgccacgctgtacctcccggaccgcacggtcggcatgctcccggacgccctggtcgag
caggccggcctgggcctgcacgacgtgacgcccgccctgtcggtgtcgctggacctggac
gccgagggcaacgccgaggcggtggacgtgcagctcacccgcgtgcgcgtgcagcgcctc
acgtactcgcaggcgcaggcgcagctggacgccgggcaggagccgttcgtgaccctggcc
cgcctggcccgcgccagccggcagctgcgcgaatcggaaggtgccctgagcatcgacctg
ccggaggtgcgcgtgaaggccgacgagcacggggccagcgtgacgcccctgccgaaaccc
gagatgcggcaggtggtgcaggagtgcatgaccctggccggctggggcgcggcgatcttc
gcggatgacaacgagatccctctgccgttcgccacgcaggaccaccccacccgcgaggtc
cgtggggacaccctgagtgcgcagtgggctcggcgcaagacgctggcccgcacgcgcttc
cagccgtcgccgggcccgcaccacggcatgggcctggacctgtacgcgcaggtcaccagc
cccatgcgccgctacctggacctggtggtgcaccagcagctccgggcgttcctggccggc
ggggagccgatgccgggcaaggtgatggcctcgcatatcgcgcaggcgcagctgaacgcg
gacggcacccggcaggccgagcgcctgagccgacggcatcacacgctgcggttcgtggcc
gcgcagcctgatcgcgtgtgggacgcggtggtcgtggaccggcggggcccgcaggcgacc
ctgctgatcccggacctggccttcgacgtgccgatgagcacgcccgcggcgcccggcacg
gccctgcgtgtgcagctcacggacgtgaacctgccggcgctgagtgtccgggtccgggcg
gtgtga
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