KEGG   Deinococcus ficus: DFI_01430
Entry
DFI_01430         CDS       T05674                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
dfc  Deinococcus ficus
Pathway
dfc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dfc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DFI_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dfc03019]
    DFI_01430
   03110 Chaperones and folding catalysts [BR:dfc03110]
    DFI_01430
   03029 Mitochondrial biogenesis [BR:dfc03029]
    DFI_01430
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dfc04147]
    DFI_01430
Enzymes [BR:dfc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     DFI_01430
Messenger RNA biogenesis [BR:dfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DFI_01430
Chaperones and folding catalysts [BR:dfc03110]
 Heat shock proteins
  HSP60 / Chaperonin
   DFI_01430
Mitochondrial biogenesis [BR:dfc03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    DFI_01430
Exosome [BR:dfc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DFI_01430
  Exosomal proteins of other body fluids (saliva and urine)
   DFI_01430
  Exosomal proteins of breast cancer cells
   DFI_01430
  Exosomal proteins of colorectal cancer cells
   DFI_01430
  Exosomal proteins of bladder cancer cells
   DFI_01430
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ASN79843
UniProt: A0A221ST82
LinkDB
Position
complement(299317..300951)
AA seq 544 aa
MAKQLVFDESARRSLERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVE
LEDKLENIGAQLLKEVASKTNDITGDGTTTATVLGQAIVKEGLRNVAAGANPLALKRGIE
KAVAVAIEEIKKQAQPVEDSDAIKKVAGISANDEVVGQEIASAMDKVGKEGVITIEESKG
FDTEVDVVEGMQFDKGFINPYFITNPEKMEAVLEDAYILINEKKVSNLKDMLPILEKVAQ
TGRPLLIIAEDVEGEALATLVVNKLRGTLNIAAVKAPGFGDRRKEMLRDIAAVTGGEVVS
EDLGHKLENVTMEMLGRAARIRITKDETTIVDGKGEQSAIDARVNAIKGELDNTDSDYAR
EKLQERLAKLSGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRV
IPAVREAAAGLIGDEATGARILIRALEEPARQIAANAGEEGSVIVNAVINSDKARYGYNA
ATGEYVDDMVAAGIVDPAKVTRTALQNAASIASLILTTEAIVSDKPEKEKAAPAGAPDMG
GMDF
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggccaaacagctcgtgtttgatgaatccgcccgtcgcagcctcgagcgcggcgtgaat
gccgtcgccaacgccgtcaaagtgaccctcgggccgcgtggccgcaacgtcgtgatcgag
aagaagttcggcagccccaccatcaccaaggacggcgtgaccgtcgccaaggaagtggag
ctggaagacaagctggagaacatcggcgctcaactgctgaaggaagtcgccagcaagacc
aacgacatcaccggtgacggcaccaccaccgccaccgtgctcggccaggccatcgtgaaa
gaaggcctgcgcaacgtcgccgccggcgccaaccccctggccctcaagcgcggcatcgag
aaggccgtggccgtcgccatcgaggaaatcaagaagcaggcccagccggtggaagacagc
gacgccatcaagaaagtcgccggcatcagcgccaacgacgaggtcgtcggtcaggaaatc
gccagcgcgatggacaaggtcggcaaggaaggcgtcatcaccatcgaagaaagcaagggc
ttcgacaccgaagtggacgtcgtcgaaggcatgcagttcgacaagggcttcatcaacccc
tacttcatcaccaaccccgagaagatggaagccgtcctggaagacgcctacatcctcatc
aacgagaagaaggtcagcaacctcaaggacatgctgcccatcctcgagaaggtcgcccag
accggccgtcccctgctgatcatcgccgaggacgtcgaaggcgaagcgctcgccaccctg
gtcgtcaacaagctgcgcggcaccctgaacatcgccgccgtgaaggcccccggcttcggt
gaccgccgcaaggaaatgctgcgcgacatcgccgccgtcaccggcggggaagtcgtcagc
gaggacctcggccacaagctcgagaacgtcaccatggaaatgctgggccgcgccgcgcgc
atccgcatcaccaaggacgaaaccaccatcgtggacggcaagggtgagcagagcgccatc
gacgcccgcgtcaacgccatcaagggcgaactcgacaacaccgacagcgactacgcccgc
gagaagctccaggagcgcctcgccaagctgagcggcggcgtggccgtcattcgcgtcggt
gccgccaccgaaacggaactcaaagagaagaagcaccgctacgaggacgccctgagcacc
gcccgcagcgccgtggaggaaggcatcgtcgccggtgggggcaccaccctgctgcgcgtc
atccccgccgtccgtgaagccgccgccggcctgatcggcgacgaggccaccggcgcccgc
atcctgatccgcgcgctggaagaacccgcccgccagatcgccgcgaacgccggcgaggaa
ggcagcgtcatcgtcaacgccgtcatcaacagcgacaaggcccgctacggctacaacgcc
gccaccggcgagtacgtggacgacatggtcgccgccggcatcgtggaccccgccaaggtg
acccgcaccgccctgcagaacgccgcgagtatcgcttccctgatcctcaccaccgaagcg
attgtcagcgacaagcccgagaaggaaaaagccgcgccggccggcgcccccgacatgggc
gggatggacttctaa

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