Deinococcus ficus: DFI_03660
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Entry
DFI_03660 CDS
T05674
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dfc
Deinococcus ficus
Pathway
dfc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DFI_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_03660
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DFI_03660
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DFI_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
AAA_22
AAA_23
nSTAND1
RsgA_GTPase
AAA_15
nSTAND3
AAA_25
ATPase_2
AAA_33
NACHT
DnaJ_CXXCXGXG
cobW
T2SSE
AAA_18
NTPase_1
Viral_helicase1
RNA12
ATPase
RNA_helicase
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
ASN80230
UniProt:
A0A221SUD1
LinkDB
All DBs
Position
727771..730857
Genome browser
AA seq
1028 aa
AA seq
DB search
MQNQNLIVRGAREHNLKDITVELPRDQFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLGLMEKPDVDSITGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLYARVGTP
YCPVCGRKIEKQSPSEITDRLLGGFTDKRAILLAPVVRGRKGEYRKLFADLRREGFARVR
VDGTLYELDEAEKLKLEKFEKHDVDVVIDRVTLREGDRSRIAESVELGLRRGEGLLRVLM
PDGGEDGGAHEELYSEKFACPEHGSVLEELEPRSFSFNNPYGACPDCAGLGSKQEFTPER
IIDEKLSIAEGAILPWTKKGTDAGIYYWDKLKALSEHLDFDLKTPWRDLPAAAQKAVLHG
PGEAFPVVYRRGGKETMRFMTEFEGVIHNLERRYADTESDFMKERLEELMDLRPCPTCGG
TRYKPEILAVRVGGLNISQASGMSVLDADAFFGWLQDGELNHDRIKPYLGQGLGGSVKAH
GPRHYEYALNDFGAAVAAPILRAIRTRLSFLVDVGLDYLSLDRTANTLSGGEAQRIRLAT
QVGSGLTGVLYVLDEPSIGLHPKDNHRLIGTLKNLRDLGNTLLVVEHDEDTMVEADYLVD
MGPGAGVHGGEVVAYGTPEQVKQDRNSLTGKYLRGELKIDVPTERRRGNGKKLRVFGAKE
HNLQNVDIEIPLGTMTVVTGPSGSGKSTLIHDILHATLARELNGAKTTPGRFDRIEGMEH
LDKVIEIDQSPIGRTPRSNPATYTGVFTEVRDLFTRTPEARRRGYQAGRFSFNVKGGRCE
HCKGDGVMKIEMNFLPDIYVPCEVCKGARYNRETLEVKYNHKTIADVLDMTVEDAHSFFE
AIPTIQRKMALLLDVGLGYMRIGQPSTTLSGGEAQRIKLATELSKRATGKTIYILDEPTT
GLHFEDVRKLMEVLQRLAEGGNTLVIIEHNLDVMKCADYLIDLGPEGGVRGGTVVATGTP
EQLAAHEGSHTGAWLRRVPGIVPAGATAVPAEAPAAPAKKPRKAAKTTQTEPRKAAPRAS
RAKKAAGA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaccagaacctgatcgtgcgcggcgcacgcgaacacaacctcaaggacatcacc
gtcgaactgccgcgcgaccagttcatcgtgatcaccggcgtgtccggcagcggcaagagc
accctggccttcgacaccatctacgccgaaggccagcgccgctacgtcgagagcctcagc
gcgtacgcccggcagttcctgggcctgatggaaaaacccgacgtggacagcatcaccggc
ctgtccccggccatctccatcgaccagaagaccaccagccacaacccccgcagcaccgtg
ggcaccgtcaccgagatccacgactacctgcggctgctgtacgcccgcgtgggcaccccc
tactgcccggtctgcggccggaagatcgagaagcagagccccagcgagatcaccgaccgc
ctcctgggcggcttcacggacaagcgcgccatcctgctcgcgccggtggtgcggggccgc
aagggcgagtaccgcaagctgttcgcggacctgcgccgcgagggcttcgcgcgcgtgcgg
gtggacggcaccctgtacgaactcgacgaggccgagaagctcaagctggagaagttcgag
aagcacgacgtggacgtggtcatcgaccgcgtcaccctgcgtgagggggaccgcagccgc
atcgcggaaagcgtggaactcggcctgcgccgcggcgagggcctgctgcgcgtcctgatg
cccgacggcggcgaggacggcggcgcgcacgaggagctgtactccgagaagttcgcctgc
ccggaacacggcagcgtgctggaggaactcgaaccccgcagtttctccttcaacaacccg
tacggtgcctgcccggactgcgcgggcctgggcagcaagcaggaattcacgcccgaacgc
atcatcgacgagaagctgtccatcgccgagggggccatcctgccctggacgaaaaagggc
accgacgccggcatctactactgggacaaactcaaggcgctgtccgaacacctggacttc
gacctcaagaccccctggcgcgacctgcccgcagccgcgcagaaggccgtgctgcacgga
ccgggcgaggcgttcccggtcgtgtaccgccggggcgggaaggaaaccatgcgcttcatg
accgagttcgagggcgtgatccacaacctcgaacgccgctacgcggacaccgagtcggac
ttcatgaaagagcgcctggaagaactgatggacctgcgcccctgccccacctgcgggggc
acgcgctacaaacccgagattctcgcggtgcgcgtgggcggcctgaacatctcccaggcg
agcggcatgagcgtgctggacgccgacgcgttcttcggctggctgcaggacggcgagctg
aaccacgaccgcatcaagccgtacctgggccagggcctgggcggcagcgtgaaagcgcac
ggcccgcgccactacgagtacgccctgaacgacttcggcgccgcggtggccgcgccgatc
ctgcgcgccatccgcacccgcctgagcttcctggtggacgtgggcctggactacctcagc
ctggaccgcaccgcgaacaccctgtccggcggagaagcgcagcgcatccgcctcgccacg
caggtcgggtcgggcctgaccggcgtgctgtacgtgctggacgaacccagcatcggcctg
caccccaaggacaaccaccggttgatcggcacgctgaaaaatctccgggatctcggcaac
accctgcttgtcgtcgaacacgacgaggacaccatggtcgaggccgactacctggtggac
atgggccccggagccggcgtgcacggcggcgaggtcgtggcgtacggcacgccggagcag
gtcaagcaggaccgcaacagcctgaccgggaagtacctgcgcggcgaactgaagatcgac
gtgcccaccgagcgccggcgcggcaacggcaagaaactcagggtcttcggcgcgaaggaa
cacaaccttcagaacgtggacatcgagattcccctgggcaccatgacggtcgtgaccggg
cccagcggcagcggcaagagcaccctgatccacgacatcctgcacgccaccctggcccgc
gaactgaacggcgcgaaaaccacccccggccgcttcgaccggatcgagggcatggagcac
ctggacaaggtcatcgagatcgaccagagccccatcggacgaacgccgcgcagcaacccc
gccacgtacaccggcgtgttcaccgaggtccgcgacctgttcacccgcacgcccgaagcg
cgccggcgcggctaccaggcgggccgcttctccttcaacgtgaaaggcggccgctgcgag
cactgcaaaggcgacggcgtcatgaagatcgagatgaacttcctgccggacatctacgtc
ccgtgcgaggtctgcaagggcgcccgctacaaccgcgagacgctggaagtgaaatacaac
cacaagaccatcgccgacgtgctcgacatgaccgtcgaggacgcccacagcttcttcgag
gcgatccccaccatccagcgcaagatggccctgctgctcgacgtcgggctggggtacatg
cgcatcggacagcccagcaccaccctgtccggcggagaagcgcagcgcatcaagctcgcc
accgaactgagcaagcgcgccaccggcaagaccatctacatcctggacgagcccaccacc
ggcctgcacttcgaggacgtgcgcaaactcatggaagtcctgcagcgcctcgccgagggc
ggcaacaccctggtgatcatcgaacataatctggatgtcatgaagtgcgccgattacctg
atcgacctcggcccggaaggcggagtgcgcggcggtacggtcgtcgccaccggcacgccc
gaacagctcgccgcccacgagggcagccacaccggcgcgtggctgcgccgggtgcccggg
atcgttcccgccggcgccactgctgttcccgctgaggcgcccgctgcgcccgcgaagaag
ccccgcaaggccgcgaagaccacgcagaccgaacccaggaaggccgccccacgggccagc
cgggccaagaaggcggcgggcgcgtga
DBGET
integrated database retrieval system