Deinococcus ficus: DFI_05405
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Entry
DFI_05405 CDS
T05674
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dfc
Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfc03009
]
DFI_05405
Enzymes [BR:
dfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DFI_05405
Ribosome biogenesis [BR:
dfc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DFI_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASN82035
UniProt:
A0A221SZG3
LinkDB
All DBs
Position
complement(1084294..1084998)
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AA seq
234 aa
AA seq
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MVLEHPDFLVVHKPALWLAHPVRGRVELPDVVSFMRAERDEPDLAPPHRLDRETSGAAVL
SRDTDAARRFFTLFKTHLVGKTYLAVVRGTPDWERRTLDAPLGELGLGGANRVAIRQAVV
PNGRPAVTDFRVVARRAGHALIEAYPRTGRLHQIRAHLRHLGLPMVGDKIYGPDPDAFLE
FVQTGQTPELTARLGLPRQALHAARIAFPWDGAQVVAEVPLAPDMQAYWDALPL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctggaacacccggatttcctggtggtgcacaagcccgcgctttggctggcgcac
ccggtgcgcggccgggtggagctgccggacgtggtgtcgttcatgcgggccgagcgggac
gagccggacctggcgcccccgcaccgcctggaccgggagacgagcggcgcggccgtgctg
tcccgcgacacggacgccgcccgccggttcttcacgctgttcaagacgcacctggtcggg
aagacgtatctggcggtggtgcgcggcacgccggactgggagcggcgcacgctggacgcc
ccgctgggcgagctgggcctggggggcgcgaaccgcgtggcgatccggcaggcggtcgtg
ccgaacggccgcccggccgtgacggacttccgggtggtggcccgccgggccgggcacgcg
ctgatcgaggcgtacccgcgcacggggcggctgcaccagattcgcgcgcacctgcggcac
ctgggcctgccgatggtgggggacaagatctacggcccggacccggacgccttcctggag
ttcgtgcagaccgggcagacgccggagctcaccgcgcggctgggcctgccccggcaggcg
ctgcacgccgcgcggatcgcctttccgtgggacggggcgcaggtggtggccgaggtgccc
ctggcgccggacatgcaggcgtactgggacgcgctgccgctctag
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