Deinococcus ficus: DFI_05700
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Entry
DFI_05700 CDS
T05674
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dfc
Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_05700
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DFI_05700
Archaeal homologous recombinant proteins
DFI_05700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_15
Gmx_para_CXXCG
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ASN80560
UniProt:
A0A221SVA5
LinkDB
All DBs
Position
complement(1152422..1155157)
Genome browser
AA seq
911 aa
AA seq
DB search
MRPLKLEVQGFTAFRQFTELEFGDLELFALVGPTGSGKSSLLDAMTFALYGETERLGSTK
LDALISQGERGMNVALTFEVGGVTYRAARTKGRKQAENEVRFERLDPDGRWTNLSEGGMR
GVNDRIRDVLGLDFRNFTRCVMLPQGEFSRLLHGSGKDRQALLGELTGLDRVQDMQRYAS
DRAKDLKHQSASLNTLLDGEYAGVTAQAVAALRAEREATDARAEALTDTREALQNRQQRL
RDQEKVYRAREDTALRVRTLDLRAAGVQEGADRAARARRVAGVLPLLDTAERTRIAQERE
ARERARAEAAAQQAERAAAAALDAAQAAATQEARIPDLEARAEALKEAEADAARLKRAGG
TPQTTHPSPLPWDEDAHFTAREAAQKAEKLRQERVQLETEKTALGAMQTRLKAEEDLQAR
EAADRDRVEREGKQAKTDLDAAQKDLDTARLEAGLASHRAHLHVGDDCPLCGQTVQRLPN
APVVNLGALEDRVQVLQATLDDRRTRFSTLRADLKTRAKWIEDKRVEVADWEAALKAREQ
DVRAAEALITGDPATEAQRLLAGLAARVREAGSDPAGARRQALADIQGIRRRVQEAQAAL
ARAQGDVAAAAATLKSAAAAASSRDAEAQDAQSQLQAALDALGMTAAQARGAGLDEADIV
ALEEAARTHTAQVAQLREALAELDRQLGAAPYDPAELAQVIRDLTATDAALKEVREQAGR
LAQSELDLRARLDRKGTIEAQAQAASRQLDTWQTLTNTLKANEFQQFLLAEVEAQLLTRA
GILLHDISDGRYRLALEKGDYVVQDLWNAGEVRGVKTLSGGETFLASLSLAIALSDYLAG
NKILGALFLDEGFGTLDPQALEAVAGALENLRTQGRMVGIVTHVESLSERLPSRLLVTKS
VAGSSVHRLDA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcccctgaagctggaggtgcagggcttcacggcgttccggcagttcacggaactg
gagttcggggacctggaactcttcgcgctggtcgggccgaccggcagcggcaagagcagc
ctgctggacgccatgaccttcgcgctgtacggcgagacggagcggctgggcagcacgaag
ctggacgccctgatcagccagggcgaacgcggcatgaatgtcgccctgaccttcgaggtg
ggcggcgtgacgtaccgcgcggcgcgcacgaagggccgcaagcaggcggagaacgaggtg
cggttcgagcgcctggacccggacgggcggtggacgaacctctcggaaggcgggatgcgt
ggcgtgaacgaccgcatccgggacgtgctgggcctggacttccggaacttcacgcgctgc
gtgatgctgccgcagggcgagttctcacggctgctgcacggcagcggcaaggaccggcag
gcgctgctgggcgaactgaccggcctggaccgcgtgcaggacatgcagcgctacgcctcg
gaccgcgccaaggacctcaagcaccagtcggcgtcgctgaacacgctgctggacggcgag
tacgcgggcgtgaccgcccaggccgtggccgccctgcgggccgagcgcgaggcgacggac
gcgagggccgaggcgctcaccgacacccgcgaggccctgcagaaccgccagcagcgcctg
cgggatcaggagaaggtgtaccgcgcccgcgaggacaccgccctgcgcgtcaggaccctg
gacctgcgtgccgccggcgtgcaggagggcgcggaccgggccgcccgggcccgccgggtg
gcgggcgtgctgccgctgctggacaccgccgagcgcacccgcatcgcgcaggagcgcgag
gcgcgcgaacgggcgcgggccgaggcggccgcgcagcaggcggaacgggccgcggcggcg
gcactggacgccgcgcaggcggcggccacacaggaggcccgcattccggacctcgaagcc
cgcgccgaggccctcaaggaggccgaggccgacgcggcccgcctgaaacgcgccgggggc
acgccccagaccacgcaccccagtcccctgccctgggacgaggacgcgcacttcacggcg
cgggaggcggcgcagaaggccgagaagctgcggcaggagcgcgtgcagctggaaaccgag
aagaccgccctgggcgccatgcagacccgcttgaaggccgaggaggacctgcaggcccgc
gaggccgccgaccgggaccgcgtggaacgcgagggcaagcaggcgaaaaccgacctggac
gccgcgcagaaggacctggacaccgcccgcctggaggcggggctggcgtcgcaccgcgcg
cacctgcacgtcggggacgactgccccctgtgcgggcagaccgtgcagcggcttccgaac
gcgccggtggtgaacctgggcgcgctggaggaccgcgtgcaggtgctgcaggccaccctg
gacgaccgccgcacccgcttcagcacgctgcgcgccgacctgaagacccgagcgaagtgg
atcgaggacaagcgcgtcgaggtcgccgactgggaggcggccctcaaggcccgggagcag
gacgtgcgggccgccgaggcgctgatcacgggcgacccggccaccgaggcacagcggctg
ctggccgggctggcggcccgcgtgcgtgaggcgggcagcgatccggccggcgcgcggcgg
caggccctggcggatattcagggcatccggcggcgcgtgcaggaggcgcaggcggccctg
gcccgcgcgcagggggacgtggcggcggcagcagccacgctgaagtcggcggcggcggca
gcatccagccgcgacgcggaggcgcaggacgcgcagagccagttgcaggcggcgctggac
gccctgggcatgaccgccgcgcaggcgcgcggtgcgggcctggacgaggccgacatcgtg
gcgctggaggaggcggcccgcacgcacaccgcccaggtcgcgcagctgcgcgaggcgctg
gcggaactggaccggcagctgggcgccgcaccgtacgatccggctgaactggcccaggtc
atccgcgacctgaccgccacggacgccgccctgaaggaggtccgggagcaggccgggcgc
ctcgcgcagtcggaactggacctgcgggcgcggctcgaccgcaagggcaccatcgaggcg
caggcgcaggcggcctcgcgacagctggacacctggcagaccctgacgaacaccctgaag
gccaacgagttccagcagttcctgctggcggaggtggaggcgcagctgctcacccgcgcc
ggcatcctcctgcacgacatcagtgacggccggtaccggctggcgctggaaaagggcgac
tacgtggtgcaggacctctggaacgccggggaggtccgcggcgtgaagaccctctccggc
ggggagacgttcctggcgtccctgtcgctggcgatcgcgctgagtgactacctggcgggg
aacaagattctgggcgcgctgttcctggacgagggcttcgggacgctggacccgcaggcg
ctggaggcggtggcgggcgcgctggagaacctgcgcacgcaggggcggatggtgggcatc
gtcacgcacgtggagagcctgtccgagcgcctgcccagccgcctgctggtgaccaagagc
gtggcgggcagcagcgtgcaccgcctggacgcctga
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