Deinococcus ficus: DFI_05715
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Entry
DFI_05715 CDS
T05674
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dfc
Deinococcus ficus
Pathway
dfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFI_05715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_05715
Enzymes [BR:
dfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DFI_05715
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DFI_05715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
OB_YrrC
AAA_11
HHH_5
nSTAND3
AAA_25
AAA_16
AAA_28
PhoH
AAA_22
AAA
NPHP3_N
NTPase_1
MeaB
Helicase_RecD
AAA_18
TPP_enzyme_M
ABC_tran
KTI12
Motif
Other DBs
NCBI-ProteinID:
ASN82046
UniProt:
A0A221SZL1
LinkDB
All DBs
Position
1156911..1159043
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AA seq
710 aa
AA seq
DB search
MSFELPREPFRVTGGVNKVRFRAESGFTVMTARIRNPEGEDPDATVIGVMPPLEAGDSFS
ADVLMEEHREYGYQYRVLNMVLEATPADLTEAGVAAYLEARVGGVGKVLAGRIAGMFGPA
TFDILENEPDRLLQVPGVTQTTLHKMASSWSQQGLERRLLAGLQGLGLSISQAQRAVKHF
GEAALERLQADLFALTEVEGIGFVTADKLWQAQGGAQDDPRRLTAAAVYALQQAAQQGGH
SFLPRARAEKGVAHYTRVTAGQARMAVDTAVELGRLSDDTPPLLNTEDPLHDGTRIYLPH
VLKAEKKLAGLIRTMLATPPSDEWTVPAGAAKGLSEEQAQVLTMLEEHRLVVLTGGPGTG
KSTTTRAVADLAERLGLEVGLCAPTGKAARRLGEVTGRTASTIHRLLGYGPAGFRHNHLE
PAPFDLLIVDEVSMCGDGLMLSFLAAVPPGARVLLVGDTDQLPPVDAGLPLLALTQAAPT
VRLSRVYRQAAENPIIRAAHGLLHGEAPAWGDPRLNLIDTEPDGGARRVALTVRELGGPS
QVQVLTPMRKGPLGVEMLNHQLQSLFNPGEGGVRIADGEARAGDVVVQTKNDYTNEVFNG
TLGTVLKAEGARLTVDFDGNIVELAGAELFNVQLGYALTVHRSQGSEWGTVLGVLHEAHM
PMLSRNLAYTALTRARDRFYAAGSPSAWQKAATRQREERHTALLERIRAR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgagctgccccgcgagccgttccgcgtgacgggcggcgtgaacaaggtccgc
ttccgcgccgaatccggcttcaccgtcatgaccgcccgcatccgcaacccggaaggcgag
gacccggacgccaccgtgatcggcgtgatgccccccctggaagccggggacagcttcagc
gccgacgtcctgatggaagaacaccgcgagtacggctaccagtaccgcgtgctgaacatg
gtcctcgaagccacgccggccgacctgaccgaggccggcgtggccgcctacctggaagcc
cgggtgggcggcgtgggcaaggtgctcgccggccggatcgcgggcatgttcggaccggcc
accttcgacatcctggaaaacgaaccggaccgcctgctgcaggtgccgggcgtcacccag
accaccctgcacaagatggcgagcagctggtcccagcagggcctggaacgccgcctgctg
gccggcctgcagggcctgggcctgagcatcagtcaggcccagcgggccgtgaagcacttc
ggggaagcggccctggaacgcctccaggcagacctgttcgcgctgacggaagtggagggc
atcgggttcgtcaccgccgacaagctgtggcaggcgcagggcggcgcgcaggacgacccc
cggcgcctcacggccgccgccgtgtacgccctgcagcaggccgcgcagcagggcgggcac
agcttcctgccgcgcgcccgggcggaaaagggcgtggcgcactacacccgcgtcaccgcc
gggcaggcccgcatggccgtggacactgccgtggaactcgggcgcctcagtgacgacacg
ccccccctcctgaacaccgaggaccccctgcacgacggcacccgcatctacctgccgcac
gtgctgaaagccgagaagaaactcgcgggcctgatccgcacgatgctcgccacgcccccc
agcgacgagtggaccgtgcccgccggcgccgccaagggcctgtccgaggaacaggcgcag
gtgctgaccatgctcgaggagcaccggctggtggttctgaccggcgggcccggcaccggc
aagagcaccaccacccgcgccgtcgcggacctcgccgagcgcctgggcctggaggtcggg
ctgtgcgcgcccaccggcaaggccgcccgccgcctgggcgaggtgaccggccgtaccgcc
agcaccattcaccgcctgctcgggtacggcccggccgggttccggcacaaccacctggaa
cccgcgccgttcgacctgctgatcgtggacgaggtcagcatgtgcggcgacggcctgatg
ctgtccttcctggcggcggtgccgcccggcgcacgggtgctgctggtgggcgacaccgac
cagctgccgcccgtggacgccggcctgcccctgctggccctgacgcaggcggcgcccacg
gtgcgcctgagccgcgtgtaccggcaggcggccgagaaccccatcatccgcgcggcgcac
ggcctgctgcacggcgaggcgcccgcctggggtgacccccgcctgaacctgatcgacacc
gaaccggacggcggcgcccgccgggtcgccctgaccgtccgggaactcggcgggcccagc
caggtgcaggtcctcacgcccatgcgcaagggcccgctgggcgtggagatgctcaaccac
cagctgcagagcctgttcaaccccggtgagggcggcgtgcgcatcgccgacggcgaggcc
cgcgccggcgacgtggtcgtgcagaccaagaacgactacaccaacgaggtgttcaacggc
accctgggcaccgtcctgaaggccgagggcgcccgcctcaccgtggatttcgacgggaat
atcgtggaacttgccggcgcggaactgttcaacgtgcagctcggctacgccctgaccgtg
caccgctcccagggcagcgagtggggcaccgtgctgggcgtgctgcacgaggcgcacatg
cccatgctgtcccgcaacctcgcgtacaccgccctgacccgcgccagggaccgcttctac
gccgccgggtcgcccagcgcgtggcagaaggccgccacccgccagcgcgaggagcggcac
accgccctgctggaacgcatccgcgcccgctag
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