Deinococcus ficus: DFI_08580
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Entry
DFI_08580 CDS
T05674
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dfc
Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfc03016
]
DFI_08580
Enzymes [BR:
dfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DFI_08580
Transfer RNA biogenesis [BR:
dfc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DFI_08580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ASN81048
UniProt:
A0A221SWN0
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All DBs
Position
1755034..1755882
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AA seq
282 aa
AA seq
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MTKIRRAKKPTPRPDTTPSPAPVQAAPTPARSAPAKAKAPAQKAKPKADGKGQPTDTIKV
YTRPGQGTRPQNAGKGEAHTPGTLRLFYALKVPVNIANPLAERQRQLRGNWRAVRADQMH
VTLAYLPSVPPEKLADLKRLGTRLTEHLPPMDVKLRGTGYFPNEGSPRVWFVKVEAEGLT
ELAAELRAGIQALGLETDEQPFKAHITLARKKGPAPRVPPLTFDAGWQAGAAALYRSILR
KTGPIYELESTFRFRGTPSTPDPATTPGTEKTLTLEVTQEKA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaatccgccgcgcgaaaaaacccaccccccgccccgacaccacgccctcccct
gctccggtccaggcggccccgactcccgcccgctccgccccggccaaagccaaggcgccg
gcccagaaagccaaaccgaaggccgacggcaagggccagcccacggacaccatcaaggtg
tacacccggcccggccagggcacacgcccgcagaacgccggaaagggcgaggcgcacacg
cccggcaccctgcgcctcttctacgccctgaaggttccggtgaacatcgccaaccccctc
gcggagcggcagcggcagctgcgcgggaactggcgggcggtgcgcgccgaccagatgcac
gtcaccctggcgtacctgccgagcgtgccgccggagaaactcgcggacctcaagcgcctc
ggcacgcgcctcacggagcacctgccgcccatggacgtgaagctgcgcggcaccgggtac
ttcccgaacgagggcagcccccgcgtgtggttcgtgaaggtggaggccgagggcctgacg
gaactggccgccgaactccgcgccggcattcaggcgctcggcctggagaccgacgagcag
ccgttcaaggcgcacatcaccctggcgagaaagaagggtccggcgccgcgcgtgccgccc
ctgaccttcgacgccggctggcaggcgggagccgcggccctgtaccgcagcatcctccgt
aagaccggccccatctacgagctggagagcaccttccggttccgtggcacccccagcacc
cccgaccccgccaccacaccaggaactgagaagacgttgaccctcgaggtcacccaggag
aaagcatga
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