Deinococcus ficus: DFI_08670
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Entry
DFI_08670 CDS
T05674
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dfc
Deinococcus ficus
Pathway
dfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFI_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfc03000
]
DFI_08670
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_08670
Enzymes [BR:
dfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DFI_08670
Transcription factors [BR:
dfc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DFI_08670
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DFI_08670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
AlkA_N
HHH_5
HsbA
HHH
Motif
Other DBs
NCBI-ProteinID:
ASN81063
UniProt:
A0A221SWP3
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All DBs
Position
1772776..1774323
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AA seq
515 aa
AA seq
DB search
MALRAAVRYSPGTTGSGRKFPCRNPVAARAPGPHNARMSLSRQIMLREMLAANAAFDGRF
ITGVVSTGIYCLPSCRAKKPKPENVVFHATPASARSAGLRPCLRCHPDHYYAGIHADETR
VAALADLPPGDLPDVPALARAAGLSVRALHALLREHLGLTPADFLARGRIAQARHLLLHT
DRPVTEIAFEVGFASLSAFGEQFRKQAGLSAQAYRDLRGARAFTLRLPAGYPLAAMLRDL
GRDRCQSTARVEGHTLHTALRLPGGVQVVHVALRAGQAEVTTAAPLSPADAAALHGMLRR
MLGLTSDPARFERLARQDAAFGPLVAGTPGYRVPLTPTPFDALVWAVAGQQVTFAFACTL
RRRLCGRLGEPAGAGLYAPPSAEGIAALSVPDLTALGFTRARAELLSRVAGLCASGALDL
DALAGGSVRAAERQLTAVPGIGPWTARYVLLRGLGAADVVPVGDSALAAGLQQLHGLPGR
PDARQVTALLAPLAPYRSLATLHVWRHHAAPKETA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgcgccgccgtccggtacagtcccggtaccacggggtcgggccggaaattc
ccgtgccggaatccggtggcggcccgcgcgcccggcccgcacaatgcccgcatgagtctt
tcccgccagatcatgctccgggagatgctggccgcgaacgccgccttcgacgggcggttc
atcacgggcgtggtcagcaccggcatctactgcctgccgtcctgccgggcgaaaaaaccg
aagccggagaacgtggtgtttcacgccacgcccgcctccgcccggtcggcggggctgcgg
ccatgcctgcgctgccacccggaccactactacgccggcattcacgcggacgagacgcgg
gtggcggccctggccgacctgccgcccggggacctgccggacgtgccggccctggcccgc
gccgccggcctgagcgtgcgggcgctgcacgcgctgctgcgcgagcacctggggctcacc
ccggcggacttcctggcccgcggccggatcgcgcaggcgcggcacctgctgctgcacacg
gaccggccggtcacggagatcgccttcgaggtgggtttcgccagcctgtcggcgttcggg
gagcagttccggaagcaggcgggcctgagcgcgcaggcgtaccgggacctgcgcggcgcg
cgggccttcacgctgcggctgcccgccgggtacccgctggccgcgatgctccgcgacctg
ggccgcgaccgctgccagagcaccgcccgggtggagggccacacgctgcacacggcgctg
cggctgccgggcggcgtgcaggtggtgcacgtggccctgcgcgccgggcaggccgaggtc
accactgctgcgcccctgagcccggcggacgcggcggccctgcacggcatgctgcggcgg
atgctgggcctgaccagcgacccggcgcggttcgagcggctggcgcggcaggacgcggcg
ttcgggccgctggtggcgggcacgcccgggtaccgggtgccgctcacgcccaccccgttc
gacgcgctggtgtgggcggtggccgggcagcaggtcacgttcgcgttcgcctgcaccctg
cgccgccggctgtgtggccgcctgggcgagccggccggcgcggggctttacgccccgccc
agcgcggagggcattgccgcactgtccgtccccgatctcaccgcgctgggcttcacccgg
gcccgcgcggagttgctctcccgcgtcgcggggctgtgcgccagcggcgccctggacctg
gacgccctggccggcgggtccgtgcgcgccgccgaacgccagctgaccgccgtgcccggc
atcggcccctggacggcacggtacgtgctgctgcgcggcctgggcgccgcggacgtggtc
ccggtcggggacagcgccctggccgcgggcctgcaacagctgcacggcctgcccggccgg
ccggacgcccggcaggtcaccgccctgctcgccccccttgccccgtaccgcagcctcgcc
acgctgcacgtgtggcggcaccacgccgccccgaaggagaccgcatga
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