Deinococcus ficus: DFI_11185
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Entry
DFI_11185 CDS
T05674
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dfc
Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfc03009
]
DFI_11185
Enzymes [BR:
dfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DFI_11185
Ribosome biogenesis [BR:
dfc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DFI_11185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASN81487
UniProt:
A0A221SXW0
LinkDB
All DBs
Position
2296392..2297303
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AA seq
303 aa
AA seq
DB search
MALNGGYSYRLPFPPSAQGTSLLDFLTAEFRHSTRQVWEERLARGEVEVAGRPATGAEQP
RPGTMVVWHRPPWDEPDVPLDYTLLYEDADLLAVTKPSGLPTLPGGGFLAHTLLTRVRAD
LDPAASPLHRLGRGTSGAVLFARTTHAAATLSADWRAGRVDKVYRALATGHFPDAGAPTD
LRTPIGPVPHPRLGRVHAATPTGKAAHSRARVLETRADSTLLDVEILTGRPHQIRIHLAA
AGHPLVGDPLYGPDGTPLADLPGLPGDLGYLLHAHTLHFHHPVTGAAVQVVSPPPPALRP
AAS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaacggaggctactcataccgcctgcccttcccgccctcggcgcagggcacc
tccctgctggacttcctgaccgccgagttccggcactccacccggcaggtctgggaagaa
cggctcgcgcgcggcgaggtggaggtcgcgggccgccccgccaccggcgcggagcagccc
cggccgggcaccatggtcgtctggcaccgccccccctgggacgaaccggacgtgcccctg
gactacacgctgctgtacgaggacgccgacctgctggccgtgacgaaaccctccggcctg
cccaccctgcccggcggaggcttcctggcgcacacgctgctcacccgcgtccgcgcggac
ctggaccccgccgcgtccccactgcaccgcctgggccgcggcaccagcggcgccgtgctg
ttcgcccgcaccacccacgccgccgccaccctcagcgccgactggcgcgccggccgcgtg
gacaaggtgtaccgcgccctggccaccgggcacttccccgacgccggcgcacccaccgac
ctgcgcacccccatcggcccggtgccccacccccgcctgggccgcgtgcacgccgccacc
cccaccgggaaagccgcacactcccgcgcccgcgtgctggaaacccgcgcggacagcacc
ctgctcgacgtcgagatcctcaccggccgcccccaccagatccgcattcacctcgccgcg
gccggccaccccctcgtcggcgacccgctgtacggcccggacggcacgcccctggcggac
ctgcccggcctgcccggcgacctgggctacctgctgcacgcccacaccctgcacttccac
caccccgtcaccggcgcggccgtgcaggtggtgtctcccccacccccggccctgcgcccg
gcagcctcttag
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