Deinococcus ficus: DFI_12335
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Entry
DFI_12335 CDS
T05674
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dfc
Deinococcus ficus
Pathway
dfc00730
Thiamine metabolism
dfc01100
Metabolic pathways
dfc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DFI_12335
Enzymes [BR:
dfc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DFI_12335
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASN81674
UniProt:
A0A221SYF1
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Position
complement(2509820..2511652)
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AA seq
610 aa
AA seq
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MPLTSDPAPTPALSTTPFPGSEKRFLTGTLHPGVRVPVRAIRQSPTVEAFSGVSRSTPNP
DLLVPDTSGPYTDPAVGIDLRRGLPVARPWLAHDARLEVTPRFAAPADLDGPLPFPAVPA
PRRTKAGQAGTQMQRARAGEITPEMEFVALRENLRQHAAFDLTQQHPGEAFGASIPREIT
PEFVRAEVARGRAVIPANVNHPELEPTILGRNFRVKVNANLGTSIVTSSIEEEVEKMVWA
ARWGADTVMDLSTGRFIHQTREWILRNSPVPIGTVPIYQALEKVGGKPEELTWALYRDTL
IEQAEQGVDYFTIHAGVRLAHVPLTARRRTGIVSRGGSILAKWCLAHHQENFLYTHFPEI
CEIMAAYDITFSLGDGLRPGSIEDANDAAQFAELDTLGELTRVAWDCGVQTMIEGPGHVP
MQLIRENMTRQLDVCQEAPFYTLGPLTTDIAPGYDHITSAIGAAQIAWYGTAMLCYVTPK
EHLGLPDRNDVREGLMAYRIAAHAADLAKGHPGAQARDNALSKARFEFRWQDQFNLSLDP
ERARALHDETLPAEAAKTAHFCSMCGPHFCSMKLSHDLRAEDVLAGLEAKAHEFRERGSA
LYTESGSGND
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgacatccgaccctgcgcccaccccggccctgtccaccaccccctttcccggc
agcgagaaacgcttcctgaccggcaccctgcacccgggcgtgcgcgtgcccgtgcgcgcc
atccgccagtcgcccaccgtggaggccttcagcggcgtgagccgcagcaccccgaacccc
gacctgctcgtgccggacaccagcggcccctacaccgacccggccgtgggcatcgacctg
cgccgcggcctgccggtcgcccggccctggctggcgcacgacgcccggctggaagtcacg
ccccgcttcgccgcgcccgccgacctggacggcccgctgcccttcccggccgtgcccgcc
ccccgccgcaccaaagccggtcaggccggcacgcagatgcagcgcgcccgtgccggcgag
atcacgcccgagatggaattcgtggccctgcgcgagaacctgcgccagcacgccgccttc
gacctgacgcagcagcaccctggcgaggccttcggtgcgagcatcccccgcgagatcacc
ccggagttcgtgcgcgccgaggtcgcccgcggccgcgcggtgattcccgcgaacgtcaac
cacccggaactcgaacccaccatcctgggccggaacttccgcgtgaaggtcaacgcgaac
ctcggcaccagcatcgtgaccagcagcatcgaggaggaggtggagaagatggtctgggcc
gcccgctggggcgcggacaccgtcatggacctctccacgggccgcttcatccaccagacc
cgcgagtggatcctgcgcaacagccccgtgcccatcggcaccgtgcccatctaccaggcg
ctggagaaggtcggcgggaagcctgaggaactcacctgggcgctgtaccgcgacaccctg
atcgagcaggccgagcagggcgtggactacttcaccatccacgccggcgtgcgcctcgcg
cacgtgcccctcaccgcgcggcgccgcaccggcatcgtgtcccggggcggcagcatcctg
gcgaaatggtgcctggcgcaccaccaggagaacttcctgtacacgcacttcccggagatc
tgcgagatcatggctgcgtacgacatcaccttcagcctcggggacggcctgcgccccggc
agcatcgaggacgccaacgacgccgcgcagttcgcggaactggacaccctgggcgaactc
acccgcgtcgcctgggactgcggcgtgcagaccatgatcgagggccccgggcacgtgccc
atgcagctcatccgcgagaacatgacccggcagctcgacgtgtgccaggaagcgcccttc
tacaccctggggccgctcaccaccgacattgcccccgggtacgaccacatcacgtccgcc
atcggcgcggcgcagatcgcgtggtacggcaccgccatgctctgctacgtcacgcccaag
gaacacctgggcctgcccgacaggaatgatgtccgcgagggcctcatggcctacaggatc
gccgcgcacgccgccgacctcgccaagggccaccccggcgcgcaggcccgcgacaacgcc
ctgagcaaggcccgcttcgagttccgctggcaggaccagttcaacctctccctggacccg
gagcgcgcccgcgccctgcacgacgagaccctgcccgccgaggccgccaagaccgcgcat
ttctgcagcatgtgcggcccgcacttctgcagcatgaaactcagccacgacctgcgcgcc
gaggacgtgctcgccggcctggaagcgaaagcccacgagttccgcgaacgcggcagtgcg
ctctacaccgagtcgggaagcggcaatgactga
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