Deinococcus ficus: DFI_12645
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Entry
DFI_12645 CDS
T05674
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dfc
Deinococcus ficus
Pathway
dfc03030
DNA replication
dfc03430
Mismatch repair
dfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DFI_12645
03430 Mismatch repair
DFI_12645
03440 Homologous recombination
DFI_12645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfc03032
]
DFI_12645
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_12645
Enzymes [BR:
dfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DFI_12645
DNA replication proteins [BR:
dfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DFI_12645
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DFI_12645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
DnaX_C
RuvB_N
AAA_30
AAA_5
AAA_14
AAA_16
Mg_chelatase
ABC_tran
nSTAND3
GntR
Motif
Other DBs
NCBI-ProteinID:
ASN81723
UniProt:
A0A221SYK1
LinkDB
All DBs
Position
complement(2579756..2582122)
Genome browser
AA seq
788 aa
AA seq
DB search
MSAIYQRARPIRWDEVVGQEHVKDVLRSALEQGRVGHAYLFSGPRGVGKTTTARLIAMTA
NCTSGGLKPCGECESCLSVRAGSHPDVMEIDAASNNSVDDVRDLREKVSLAAMRGGKKIY
ILDEAHMMSRAAFNALLKTLEEPPGHVIFILATTEPEKIIPTILSRCQHYRFRRLTAEEI
AGKLAGLAQKEGVSAEPDALHLIGRLADGAMRDGESLLERMLAAGSAVTRAGVEEALGLP
PGERVRAIAAGLVLGDAASALGGAAQLYRDGFAARTIVEGLVAAFGTALHAELGLTPDGR
LDGADLPRLLKLQAALDEQGARFARSADQQSLELALTHALLAADSSPAGASTHAAAPAAA
SVPTDLVQRLNRLEKELATLRASGPRPAASAAAVPDFDPGARRGPAPAREVVQDAAAGLS
AAPVQGSWTDVVRHASIQMKAFLKPARTHAEPGYVSLTYDDRNAFHAKQIVGKFDDVAKL
VQRVFGPVTFELIAPEGSRKVTLGGTPGTAGMSAAPPPAPTPPARAAAEPTPPGPDVAPF
EPAPRRGSARGPAFDPVPPSASAAAEPPLPHARPETPQATAAEPVPLTPGLPPRPPARGA
PVATLTRPSLAPTARAEVRVPPPSPDDAAPAPLPAPSPEPWDAEPLTDGPPAPADAQGGD
RITPPGQSRDLYVVEAITQEPDWGDIGGNVGGPLLEAAPDLDDSPFAEFVPKRPDPAPRA
APAPAPTPATAPAARAVIGDIRAHPMYEDIRGRFSGRVREIGKNRRIQAAPDPTDAPPPE
EEAGDSDS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccatctaccagcgcgcccggcccatccgctgggacgaggtggtcgggcaggaa
cacgtcaaggacgtgctgcgcagcgccctggaacagggccgggtcgggcacgcgtacctg
ttcagcggcccgcgcggggtggggaagaccaccaccgcgcgcctgatcgccatgaccgcc
aactgcacgagcgggggcctcaaaccctgcggtgagtgcgaatcctgcctgagcgtgcgc
gccggctcgcacccggacgtcatggagatcgacgccgccagcaacaacagcgtggacgac
gtccgcgacctgcgcgagaaggtctccctggccgccatgcgcggcggcaagaagatctac
atcctggacgaggcgcacatgatgagccgcgcggccttcaacgccctcctgaaaacactg
gaggagccgcccgggcacgtcatcttcatcctggcgaccaccgaaccggaaaagatcatc
cccaccatcctctcccgctgccagcactaccgcttccggcgcctgaccgccgaggagatc
gccgggaaactcgccggcctcgcccagaaagaaggggtgagcgccgaaccggacgccctg
cacctgatcggccgcctcgccgacggcgccatgcgcgacggcgagagcctcctggaacgc
atgctggccgccggcagcgctgtcacccgcgcgggcgtggaagaagccctgggcctcccg
cccggcgaacgcgtgcgcgccatcgccgccggcctcgtgctcggggacgccgccagcgcc
ctgggcggcgccgcgcagctttaccgcgacggcttcgccgcccgcaccatcgttgagggg
cttgtcgccgcgttcggcaccgccctgcacgccgaactgggcctcaccccggacggccgc
ctggacggcgccgacctgccccggctgctcaaactgcaggccgcgctggacgaacagggc
gcccgcttcgcccgcagcgccgaccagcagagcctggaactggccctcacgcacgccctg
ctcgccgccgacagcagcccggccggagcctccacgcatgctgcggcaccggccgcggcc
agcgtgcccaccgacctcgtccagcgcctcaaccgcctggagaaggaactcgccacgctg
cgcgccagcggcccccgccccgccgcctccgccgcggccgtgcccgacttcgacccgggg
gcccgccgcggccccgcgcccgcccgcgaggtcgtgcaggacgccgctgccggcctgagc
gccgcgcccgtgcagggcagctggacggacgtcgtccggcacgccagcatccagatgaag
gccttcctgaaacccgcccggacgcacgccgaacccggatacgtcagcctcacctacgac
gaccgcaacgccttccacgccaagcagatcgtcgggaagttcgatgacgtcgccaaactc
gtccagcgggtgttcggccccgtcaccttcgaactgatcgccccggaaggcagccgcaag
gtgaccctgggcggaactcccggaacggcgggcatgagcgcggcacctccgcccgccccc
acccccccggcccgcgcggccgccgagcccaccccgcccgggccggacgtcgcccctttt
gagccggcgccgcgccgcggaagcgcccgcggcccggccttcgacccggtgcccccgtcc
gcgtccgccgcggccgagccgccgctgccccacgcgcgcccggagaccccacaggccacg
gcggcagaaccggtgcccctcacgcccggcctgcccccccgccctcccgcccgcggggcc
ccggtggcgaccctcacccgccccagcctcgcccccaccgcccgggcggaggtgcgcgtg
ccgccgcccagcccggacgacgcggcccccgcgcccctcccggccccctcccccgagccg
tgggacgccgagcccctcacggacgggccgcccgcccccgccgacgcgcagggcggcgac
cgcatcaccccgcccggccagtcccgggacctgtacgtggtggaagccatcacgcaggaa
cccgactggggcgacatcggcggcaacgtgggcggcccgctgctggaagccgcgccggac
ctggacgactcccccttcgcggaattcgtgcccaaacgcccggaccccgccccccgcgct
gcccctgcccccgcgcccaccccggccaccgccccggcagcccgcgcggtgatcggggac
atccgcgcgcaccccatgtatgaggacatccggggccgcttctccggccgcgtgcgcgag
atcggcaagaaccgccgcatccaggctgcccccgaccccaccgacgcccccccgcccgag
gaagaagccggcgacagcgacagctga
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integrated database retrieval system
