KEGG   Deinococcus ficus: DFI_13420
Entry
DFI_13420         CDS       T05674                                 
Name
(GenBank) topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dfc  Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:dfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfc03032]
    DFI_13420
   03400 DNA repair and recombination proteins [BR:dfc03400]
    DFI_13420
Enzymes [BR:dfc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DFI_13420
DNA replication proteins [BR:dfc03032]
 Prokaryotic type
  DNA Topoisomerases
   DFI_13420
DNA repair and recombination proteins [BR:dfc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DFI_13420
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: ASN81854
UniProt: A0A221SYY8
LinkDB
Position
complement(2747215..2748255)
AA seq 346 aa
MPSRTELLAAEYLRREGHDPKAFRYFTPDGREYRNRAGLARIAALAVPPAYQDVYVSPDP
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLSRFAGVLPDLRAATTADLRSAGLPP
RKVTALMTRLLHVARFRVGSDAYAQHNRTYGLSTLRQRHVVVEGSTVTFRFRGKHGISQH
KATTDRTLAANISKLLELPGPWLFQAADDAAGGRRRVRAPELNTYLREVIGPFTAKDFRT
WGGTLLAAEFLAEAGTADTERSAKRTLVECVKYVADDLGNTPAVTRGSYICPVIFDRYLD
GKVLDDYEPRTARQEAALDGLTRSEAALKRMLDSERALRTRARKAA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgccgtcccgcactgaactgctggccgcggagtacctgcgccgcgagggccacgacccg
aaagccttccggtacttcacgccggacggccgggagtaccgcaaccgcgcgggcctggcg
cgcatcgcggcgctggccgtgccgcccgcttaccaggacgtgtacgtgtcacccgacccg
gacgcggaactgcaggccttcgggcgggacgccgcaggccggttgcagtaccgctaccac
ccggatttcgtgcaggccggcgcgctgaagaaatggcagcggctctcgcggttcgccggg
gtgctgccggacctgcgggcggctaccacggcggatctccgttcggcgggcctgccccca
cgcaaggtcacggccctgatgacgcggctgctgcacgtggcccgtttccgggtgggcagc
gacgcgtacgcccagcacaaccgcacgtacggcctgagcaccctgcggcagcggcacgtg
gtcgtggagggcagcaccgtcacgttccggttccggggcaagcacggcatctcgcagcac
aaggcgaccaccgaccgcacgctcgccgcgaacatctcgaaactgctggaactgccgggc
ccgtggctgttccaggcggcggacgacgcggccggcgggcggcgccgcgtgcgcgccccg
gagctgaacacctacctgcgcgaggtgatcgggccgttcaccgcgaaggacttccgcacc
tggggcggcacgctgctggccgccgagttcctcgcggaggccggcaccgcggacaccgag
cgcagcgcgaagcgcaccctggtcgagtgcgtgaagtacgtggccgacgacctgggcaac
accccggccgtcacgcgcggcagctacatctgcccggtgatcttcgaccggtacctggac
ggcaaagtcctcgacgattacgagccgcgcaccgcccggcaggaagcggccctggacggc
ctgacccgcagcgaggcggccctgaaacgcatgctggacagcgaacgcgccctgcggacc
cgggcccggaaggccgcgtga

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