KEGG   Deinococcus ficus: DFI_18010
Entry
DFI_18010         CDS       T05674                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
dfc  Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:dfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfc03032]
    DFI_18010
   03036 Chromosome and associated proteins [BR:dfc03036]
    DFI_18010
   03400 DNA repair and recombination proteins [BR:dfc03400]
    DFI_18010
DNA replication proteins [BR:dfc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DFI_18010
Chromosome and associated proteins [BR:dfc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DFI_18010
DNA repair and recombination proteins [BR:dfc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DFI_18010
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2780
Other DBs
NCBI-ProteinID: ASN83069
UniProt: A0A221T2F5
LinkDB
Position
pDFI2:complement(346364..346738)
AA seq 124 aa
MLLTMTKKSSKAPAKKPAASAKAAPRKAAAGESNKVAKTQLVEMVADKTGLTKKQSEEAV
SAMLDAIVTAVKGGKSVGMPGLGTLSVKATAARTGVRPGTSEKIQIPAGKKVAFKVASTL
KGNL
NT seq 375 nt   +upstreamnt  +downstreamnt
atgctgctcaccatgaccaaaaagtcatcgaaggcccccgccaagaagcccgctgccagc
gccaaagctgctccccgtaaggctgccgccggcgagtccaacaaggtcgccaagacccag
ctggtggaaatggtcgccgacaagaccggcctgaccaagaagcagagcgaggaagccgtc
agcgccatgctggacgccatcgtgaccgccgtgaagggcggcaagagcgtcggcatgccc
ggcctcggcaccctgagcgtcaaggccaccgccgcccgcaccggcgtgcgccccggcacc
agcgagaagatccagattcccgccggcaagaaggtcgccttcaaggtcgccagcaccctc
aagggcaacctgtaa

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