Deinococcus ficus: DFI_19300
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Entry
DFI_19300 CDS
T05674
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dfc
Deinococcus ficus
Pathway
dfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFI_19300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfc03000
]
DFI_19300
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_19300
Enzymes [BR:
dfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DFI_19300
Transcription factors [BR:
dfc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DFI_19300
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DFI_19300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ASN83346
UniProt:
A0A221T3C6
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All DBs
Position
pDFI3:204209..205774
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AA seq
521 aa
AA seq
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MNPVDLHPPRWDNHGMSAPLHRELMLDRMLAADRAYDGRFITGVVSTGIYCLPSCRARKP
KPENVVFHFTPGQARAAGLRACLRCRPDDFYADVHRDEARVEALMALIDASPAAVRNVRD
LARLADVSPSKLHDLFRMHLHTTPVEWLARQRVAHAQRLLMTTARTAAEIAFDVGFESLS
AFGEQFRRWSALTPHAYRRLPHTQAIRLTLPPGYPTAALLRDLGRDPASLTDRVDGQRYT
AAVRLTSGAVVIQVDFTPGTATCTVLSPQSLEGLNWAELHGMLLRRLGLTTDPSRFEAHV
TAASDLAPLLSGGHGLRTPLIADLFDGLLWAIVGQQVNFPFACTLRRRITERAGELVMDG
LFAPPTPDAVLALTDADLVGLGLTRARAGYLRHAARQVVDGQLPLTALATGTATRAERTL
LAQNGIGPWSAHYVMLRVFGFQDCVPLGDTALATALQRHFALPSRPDRAQTTELMARFAP
YRSLATLHFWRHFQSTKETSHDHVPPARLHPRPSLPVAASG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggtagacctccacccaccccgctgggacaatcacggcatgtctgcgcccctt
caccgcgagctgatgctcgaccgcatgctcgcggccgaccgcgcctacgacggccgcttc
atcaccggggtcgtcagcacgggcatctactgcctgccgtcctgccgcgcccgcaaaccc
aaacccgagaacgtcgtctttcacttcacacccggccaggcccgggccgcgggcctgagg
gcctgcctgcgctgccggccggacgacttctacgccgacgtgcaccgcgacgaagcccgc
gtcgaagcgctgatggccctgatcgatgcctcccccgcggccgtgcggaacgtccgggac
ctcgcccgcctggcggacgtcagccccagcaaactgcatgacctgttccgcatgcacctg
cacaccacgcccgtggaatggcttgcccggcagcgggtcgcgcacgcgcagcggctgctc
atgaccaccgcccgcaccgccgcggagatcgccttcgacgtcggcttcgagagcctctcg
gcgttcggtgagcagttccgccgctggagtgccctgaccccccacgcctaccgccgcctg
ccgcacacccaggccatccgcctgacgcttccccctgggtaccccacggccgccctcctc
cgggacctgggccgcgacccggccagtctcaccgaccgggtggacggtcagcggtacacg
gccgccgtgcgcctgacgtccggcgccgtggtcatccaggtggacttcacgcccggcacg
gccacctgcaccgtcctctctcctcagtctctcgaaggactgaactgggccgagttgcac
gggatgctcctgcgccgcctgggcctgaccaccgaccccagccgcttcgaggcgcacgtg
accgccgcctccgatctcgcccccctgctcagcggcgggcacggcctccgcacgcccctg
atcgccgacctcttcgacggcctgctgtgggcgatcgtgggccagcaggtgaacttcccc
ttcgcctgcaccctgcgccgaaggatcaccgaacgcgccggggagctggtgatggatggc
ctgttcgcgccgccgacccccgatgccgtcctggccctgaccgacgcggacctggtcggg
ctgggcctgacccgcgcccgcgccggatacctccgccacgccgcgcgacaggtcgtggac
ggccagctgcccctgactgccctggccaccggcacggccacccgcgccgaacgcaccctg
ctggcccaaaacggcatcggcccctggtcagcgcactacgtgatgctccgcgtgttcggc
tttcaggactgcgtgccgctcggcgacaccgccctcgccactgccctgcagcggcacttc
gcccttccaagccggccggaccgggcgcagaccaccgagctcatggcccgctttgccccc
taccgcagcctggccacccttcacttctggcgtcacttccagtccaccaaggagacctcc
catgaccacgtccccccagcccgcctccaccctcgcccatcacttccggtcgctgcatca
ggctga
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