Desulfurococcus amylolyticus DSM 16532: Desfe_0141
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Entry
Desfe_0141 CDS
T02136
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Desfe_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfd03019
]
Desfe_0141
03009 Ribosome biogenesis [BR:
dfd03009
]
Desfe_0141
04131 Membrane trafficking [BR:
dfd04131
]
Desfe_0141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfd04147
]
Desfe_0141
Messenger RNA biogenesis [BR:
dfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Desfe_0141
Ribosome biogenesis [BR:
dfd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Desfe_0141
Membrane trafficking [BR:
dfd04131
]
SNARE
SNARE associated proteins
Others
Desfe_0141
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Desfe_0141
Exosome [BR:
dfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desfe_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_5
AAA_22
AAA_33
AAA_2
AAA_14
AAA_28
Vps4_C
RNA_helicase
IstB_IS21
AAA_lid_PRS2_C
nSTAND3
AAA_18
Mg_chelatase
Parvo_NS1
AAA_24
AAA_25
ABC_tran
TsaE
AAA_7
NPHP3_N
ATPase_2
AAA_3
Zeta_toxin
DUF815
ATPase
AAA_17
PhoH
DUF5906
NACHT
SLFN-g3_helicase
bpMoxR
Bac_DnaA
AAA_6
KAP_NTPase
DUF1905
eIF-1a
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AFL66054
UniProt:
I3XQ30
LinkDB
All DBs
Position
complement(125096..127336)
Genome browser
AA seq
746 aa
AA seq
DB search
MSSQKRSEKGIKLRVGEARQRDVGRKIARIDRETMEKLGVSLGDFIEVIGPKGSDVVKVW
QAYPEDEGAGLIRIDGMVRKKLGVSPGDYVTVRPISVEPAVKVTVAPIGELPVYGDLSSY
IKRQIMGNPVKRGDIIEVPLYGMLLRFAVISTQPSTIVYITEHTYIEVRTEPVRPEVLGE
GIPKVTWEDIGDLEEVKQKIREIVELPLKYPELFEHLGIEPPKGILLYGPPGTGKTLLAK
ALANEIGAYFVTINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDEIDSIAPKREEV
TGEVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDALDPALRRPGRFDREIEIPPPDKRA
RREILAVHTRNMPLAEDVDLDKIADTTHGYTGADIAALVKEAAINALRRFMKEEGIEIEK
GQPIPAEKLEKLKVTMDDFLTAMKNVQPSLIREVFVEVPSVHWDDIGGLEDVKQELREAI
EWPMKYPHVFEKMGLEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVG
ESEKAIRQIFRRARMVAPAVVFFDEIDSIAGVRGSDPSGVIDRIVNQLLTELDGIQPLRR
VVTIAATNRPDLLDPALLRPGRFDRLVYVPPPDYNARLQIFKVHTRKLPLAEDVNLDELA
RRTEGYTGADIAAVCREASLIALRERYRSTGTLDVVKVGMEHFIKALEKVPPLLSKSNIE
MYERLAKELKRVSGSGSFRRVSLPYG
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcagaagagaagtgaaaaagggattaagttaagggttggtgaggcaaggcag
agagatgtaggtagaaaaatcgcgcggatcgatagggaaaccatggagaaactaggtgtt
tcactaggagactttatcgaggtcattggtccaaagggtagtgatgtagtgaaggtttgg
caggcttaccctgaagacgagggtgcagggctgatacgaatagatggaatggttagaaag
aaactaggtgtttcaccaggcgactacgttactgttagaccgatatctgtagaaccagcg
gtaaaggtgactgttgcacctattggtgagttaccagtgtacggtgatttatccagttat
attaagagacagataatggggaacccggttaagaggggagatataatcgaggtaccatta
tacggtatgctcctcaggtttgccgtgataagtactcaaccctctaccatagtatatata
actgaacacacgtatatcgaagttaggaccgagccggtgaggcccgaggtacttggcgag
ggcattccgaaagtaacatgggaggacatcggagacttagaggaggttaagcagaagata
agggagatcgttgagctacctttaaaatacccagagctcttcgagcatctgggtatagag
ccgcctaaggggatattgctctatggtccaccgggcacaggtaagacgctgctggctaag
gcgttagctaacgaaataggggcttactttgtaactattaatggaccggagataatgagt
aaattctacggtgaatccgaggagaggctgagaaagatattcgaggaagcccaggccaac
gcaccagccgtcatattcattgatgagatagatagcattgctcctaagcgtgaggaggta
actggtgaagtggagaaaagagtggtggcgcagcttctcacgttgatggatggtttgaag
gagaggggtaaagtaatagttatcggtgcaacaaaccgaccggatgcattagatcccgct
ctcaggagacccgggagatttgacagggaaatcgagatacctccaccagataagagagca
agaagggagatcctggctgtacatactaggaacatgcctctagccgaggatgtagacctc
gataagatagctgatacgactcatggatacaccggggccgatatagcggcgcttgtgaaa
gaagccgcaataaatgccttaaggagattcatgaaggaggagggtatagagatagaaaaa
gggcaaccgataccagcagagaagctggagaagctgaaggtgacgatggatgattttctc
acagcaatgaagaatgtgcagccctcattaatcagggaagtattcgtagaagtaccaagc
gtgcattgggatgatataggcgggttagaggatgttaaacaagaattaagagaagccatt
gagtggccgatgaagtatccacatgtattcgagaagatgggtttggagccgcctaaagga
atactattgtttggtccccctggaacaggcaagaccttgcttgcaaaggctgttgcaacc
gagagcggagcaaactttataactgtaagggggccagaagtgctcagtaaatgggttgga
gaatctgagaaggctattagacagatatttagaagggctagaatggttgcaccagccgtt
gtattctttgatgagatagacagtatagctggtgtcaggggaagcgatcccagcggtgta
atagatagaatagtcaaccagttattaacggagctcgacggtatccagcctttgagaagg
gttgtgacaatcgccgccacgaataggcctgacctcctggatccagctctcctgaggccg
ggtagattcgaccgccttgtatatgtgccgcctccagactataatgcgaggctccagatc
ttcaaggtccatacaaggaagctacctctagctgaagacgtgaacctggatgagttagca
aggaggacagagggttacacgggtgctgatatagcggctgtatgcagggaggcatcacta
atagctctaagggagaggtataggagcactgggaccctggatgtagttaaggtggggatg
gagcacttcattaaggctttagagaaggtacctcccttgctgagtaaaagcaatatagag
atgtatgagaggcttgcaaaggaattaaagagggttagcggcagcggctcctttagaagg
gtttcactaccctacggctag
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