Desulfurococcus amylolyticus DSM 16532: Desfe_0360
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Entry
Desfe_0360 CDS
T02136
Name
(GenBank) solute binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desfe_0360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfd02000
]
Desfe_0360
Transporters [BR:
dfd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desfe_0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
ArsB
DUF4064
NPV_P10
DUF5798
Motif
Other DBs
NCBI-ProteinID:
AFL66270
UniProt:
I3XQP6
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All DBs
Position
332366..335314
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AA seq
982 aa
AA seq
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MNKYIPLLLLTIVLVSILVIPTQITSAQATQPGPASDKIVVTRKTIEEVPDALSSGKIDG
YLYSLRPAQAAQLQGVSGVTLYSAPAGLIELTLNPAPVAVFTLEGTLSISEAASKLGIPA
AAITNLYTQGGKTVVEVGAYPGKGINPFAFKEIRFAMNYLIDRVTVASTIMKGFAVPMYT
FLSQYDPDYATIADIIAKYEFTYNPSYVDQVVTNVLTKVGAVKIGGKWTYEGQPIAIKFI
IRQEDERRDIGYTFSSELKKLGFEVNEMEMPFAQAINIIYGTDPIEFQWHIYTAGWGKGG
IDRYDYGTISQFCASWYGYMPGWGETTFWNFKDDIVDELTLRIYQANYTNKEERDELYRK
AAELCIQDSVRIWVVTRLDAWPMRSEVKGITLDLGAGLRGIWNLREMYIEGRNTLNLAHL
WVWTSSSAWNIWGGFSDVYSVDFERATYDPSMWNHPFNGEPMAFRAPYVVVTAGPSGKLN
VSSNAVIWDVSKKQWVPVSNGTQATSKVIFDFSKLIGAKFHNGITISWADVIGFLAYMFD
LVYDPTYSSLEPRISASSKPWADTIKGFEFDFNNKRVTVYVDYWHFDENYIASWASFSPV
NPVEIHAATFELALDRRNETNYVLYQKKGYEWFSLVWPDHVAEVKATLQSYKNNQAVLNK
VNKYAMGTLNMNEWNARIDADLNWINTYNLAWISYGPFMLTKLDTQNQVLELTAFRDPTY
PFKKGDWYFGQPVATSIVSVSIESPIQGKILPGQTANITVKLSGIPPFSLKYMIRDPRGI
IITSGDGLKVSEDTFRVVLDSNFTKTLAYGSTYTVILIGLSEEVAIPGITRQVVNTVTLS
EALSAQSISDVLANVKASALEQVNIILSQLKQERTVDLESLRDQLATAISGVTGVLIDQY
VSLIGTTMDNMNRLSQTTASTITSQVSSQIQQIRSDVTALSEKLDATQSTVSSLQTYIVV
NIVLTLVAIVLSIVALVRKPKA
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatatattccattactattattaacaatagtattggtctcaatactagttata
cccacacaaataacatcagcccaagctacgcagccaggccccgcatcagataaaatagta
gtcacaaggaaaaccattgaggaagtaccagacgccctgtccagtggtaaaatagatgga
tatctctacagcttaaggccagcacaggctgcccagttacaaggtgtatccggtgtaact
ctgtattcggctccagcaggcttaatagagttgacattgaatcctgcccccgtagctgta
ttcactttggaggggactctttcaataagtgaggcagcctctaagctaggtattccggca
gccgcgataactaacctgtatactcagggaggtaaaacagttgtagaggtcggagcatac
cccggcaaaggcattaacccattcgcatttaaagagatcaggttcgccatgaactactta
atagatagggtcaccgtggctagcacgataatgaagggtttcgctgtccccatgtacaca
ttcctgagccagtacgaccctgattatgctacaatagcggatatcattgccaaatacgag
ttcacttataacccatcatatgtcgaccaagtagtcacgaatgtgttaaccaaggtaggt
gctgtgaagatcggtggaaaatggacttacgagggtcaacccatagcaatcaaattcatt
attaggcaggaggatgagaggagagacataggttacacattctcctcggagctcaagaag
ctgggctttgaggtcaacgagatggagatgccattcgcgcaggcaataaacataatctat
ggcactgacccaattgaattccaatggcacatatacactgctggatggggtaagggcggt
atagaccgctatgattatggaacaatctcacagttctgtgcctcatggtatggctacatg
cctgggtggggtgagactacattctggaactttaaggatgatatagttgatgaactcact
ttgagaatataccaagccaattacactaacaaggaggagagggacgagctgtacaggaag
gcagccgagctatgtatacaggactctgttagaatatgggttgtaactaggttggatgcc
tggcctatgagaagcgaggttaaagggatcacgctggatcttggtgctggtttaagaggc
atatggaatctgcgtgaaatgtatatcgaggggcgcaatacattaaatctggctcactta
tgggtatggacatcctcgagtgcatggaatatctggggtggattcagcgatgtatacagt
gttgactttgagagggccacctacgatccctcgatgtggaatcacccattcaacggtgag
ccaatggcgtttagggcgccttacgtggtagttacagctgggccctcaggtaagttgaat
gtgtcttctaatgctgtgatatgggatgtatcaaagaagcaatgggtacctgtatccaat
ggtacgcaagcaacaagcaaggtaatcttcgacttcagcaagctaataggtgctaaattc
cataatgggataaccataagctgggccgatgtaataggtttcctggcatacatgttcgac
cttgtgtatgacccaacatacagtagcctagagcccaggatatccgcatcttcgaagcct
tgggcagacacaataaagggattcgagttcgacttcaacaataagagggttactgtatac
gttgactactggcacttcgatgaaaactatattgcatcatgggcctccttcagccctgta
aacccggttgaaatacacgctgcaacctttgagctagctcttgacaggaggaacgaaaca
aactacgtactataccagaagaagggttatgaatggttcagcctagtatggcctgaccac
gttgcagaagtaaaggcaacactgcagtcatacaagaacaaccaggctgtgttaaacaag
gtgaacaagtatgccatgggcacactcaatatgaatgagtggaatgctagaatagatgcc
gacttaaactggatcaacacctataatcttgcatggataagctatggtccattcatgctg
acaaagctagatacacagaaccaggtattagagctcacggcgttcagggatccaacatac
ccgtttaagaagggagactggtattttggacaaccagtcgctacttcaatagtatcagta
tcaatagagtctccaatacagggtaagatactgccaggtcaaacagccaacattactgtg
aaactatccggtatcccaccattctcactgaaatacatgatcagggatcccagaggaata
ataataactagtggagatggattaaaggtaagtgaggatacattcagggttgtacttgac
tcgaacttcactaagacactggcatatggaagcacgtacacggtaatactcattggttta
tcagaggaggtagccatacccgggataacgcgtcaggtcgtgaatacagtaacgctctct
gaggctctctcggcacagtctataagtgatgtattggctaatgtaaaggcatcagcgtta
gaacaagtgaatatcatattatcacagctgaaacaagagaggaccgtggatcttgaatca
ctaagagaccagttggcaaccgccatcagcggtgttactggggtattgatagaccagtac
gtttcgttaatcggcacaacaatggacaacatgaataggttatcgcagaccacggcttca
acaataacttcacaggtttcctcacaaatacagcagattagatcggatgttacagcttta
agcgagaaacttgatgctacacagagcaccgtgagtagcttacagacatacatagtggtt
aacatagtgttaacactggttgcaatagtcttatcaatcgtagccctggtaagaaaacct
aaggcttag
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