Desulfurococcus amylolyticus DSM 16532: Desfe_0362
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Entry
Desfe_0362 CDS
T02136
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02034
peptide/nickel transport system permease protein
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desfe_0362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfd02000
]
Desfe_0362
Transporters [BR:
dfd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desfe_0362
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AFL66272
UniProt:
I3XQP8
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Position
336648..338579
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AA seq
643 aa
AA seq
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MAATRELRFKDKLVLRVVNPLKGVLKEIWSMTTGKIALILLLILIAVSVSAALTMPPGFL
DSWQSASFWEDNPVIVPPEWVKYFGAKIAPSIVEEKSKPDVTPQWDPSTGILTLTYRFEY
TLTDPVFPQDYYFAVYGIKSYDNITPIITISVERPDGVTSVLWQENIFINNTSANATSIY
KTDPKKIKMDDLVSEIFAKYNITVPPNIIGENYMIQAISSSLLRDRVISKISQPSTALSI
FQKPVNVENWVTALRSEQRPGLEEINNLLKNIRGSISNDPANILPLIDNAISNVTFLINN
LDKITFSDLYETLQNVSTLLNNAYKLAMSENYPSVVVTNINDAKSRIDKYLDSLKVTVSF
IGVSPEFEILTGTYRFEVNITYPGIRTYPSNPQSLISYIKFTVKGSVKGTLGTINNGADL
ATLLYYGFPIALLIGLIASVSSTLIGVIAGIISGYYGGWIDEVIQRIIDILNNIPFLPLM
IIIGTAAMKVLPPGTQKSFYIIMLYVAILIIFSWAGLAIVVRSMTLSIKEEPYIEAAKAM
GASNTRIIFYHIFPQVMMYAVATLVYNVPSAILTEAGLSVLGLRHGWPTWGAVLAEARAA
GPVGYAAWWWILPPGLLLSLTSLTFVLLGLAVEKIVEPRLRTL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaagggagttgagatttaaggacaaattagttctcagggtagtgaatccc
ttaaagggtgttctaaaggaaatatggagtatgacaacaggtaagatagcattaatatta
ttattaatcctaatagctgtctctgtatcagccgcattaacaatgcctcctggcttcctg
gactcatggcagagcgcgtcattctgggaggataaccccgtcatagtaccaccagaatgg
gtgaaatactttggtgcaaaaatagccccaagcatagttgaggagaaatcgaagcctgat
gtcacgcctcaatgggatccctcaacaggcatacttacattaacatataggtttgaatat
actttaaccgatccagtatttccacaggactattatttcgcagtctacggtataaaatcc
tatgataatattaccccgataataactataagcgttgaacgcccggacggtgttacaagt
gttttatggcaggagaacatatttataaataacactagtgctaatgctacatcaatttac
aagacagacccgaagaaaataaagatggatgatcttgtctcggaaatatttgcgaaatat
aatatcacagtaccccccaatataatcggagaaaactacatgatacaggcaatatcaagc
tcgttgctacgtgatagagtaatttcaaagatatcacagccttcaacagctctctcgatc
ttccagaaaccagttaacgtggagaactgggtaaccgcgttgagaagtgaacaaagacca
ggacttgaggaaataaacaacttgctaaagaacatcagaggctccatcagtaacgatcca
gccaacatattaccgctcatcgataacgccatatctaatgttacgttccttataaacaac
ctggataaaataacattcagtgatctctatgagacacttcaaaacgtttcaacgctctta
aataacgcgtataagttagctatgagtgaaaactacccctcggtagttgtgactaatata
aatgatgcgaagagtagaatagacaaatatcttgactcactaaaggtcacggtttcattc
attggtgtaagccctgagttcgagatattaacggggacatataggttcgaagtaaatatt
acttatccagggattagaacatatccgtctaacccgcagtcgctaataagctatataaaa
ttcactgtgaagggctcagtaaagggaacacttggcactataaataatggtgctgactta
gccacgctactatactatggtttcccaatagccttactaataggattaatagcatcggtg
tcttcaacactcataggcgttatagctggtattataagtggatactatggtggatggatt
gatgaggttatccagagaataatagatatattgaataacataccattcctcccattaatg
ataattattggcacagccgcgatgaaagtgcttccacctggcacacagaaatccttctac
ataataatgctatatgttgcaatactgataatattcagctgggctggtctagcaatagtt
gtacgctcaatgacgctcagcataaaggaggaaccatatattgaggctgctaaggctatg
ggtgcatctaatacgcgtataatattctaccatatatttccacaggtaatgatgtatgct
gttgcaaccctggtatataatgtcccgagcgcgatactaacagaagccgggctaagcgtg
ctagggctcaggcatggatggcctacatggggtgctgtgctagccgaggcgagggcagct
ggaccagttggatatgctgcatggtggtggatactgccgcccggactattactctctctg
acatcactaacattcgtattactcgggttagcagttgaaaaaatagttgagccacgctta
aggactctatag
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