Desulfurococcus amylolyticus DSM 16532: Desfe_0657
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Entry
Desfe_0657 CDS
T02136
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desfe_0657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfd02000
]
Desfe_0657
Transporters [BR:
dfd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desfe_0657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Imm48
Flp_N
Motif
Other DBs
NCBI-ProteinID:
AFL66558
UniProt:
I3XRI4
LinkDB
All DBs
Position
624545..626677
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AA seq
710 aa
AA seq
DB search
MSKALSRTVAILLILIVVIAIGIGAYYWSSMQQPTQVIKPTKPIHTQVLYLISNDENTRI
QLYQSGTVDIAAVTPSRWRDINNTPVGNFKLVLAFDPSRPMLTIQHVILNTMREPFNITE
VRQALAWATPYQAILDQVFSGLYTRLYTIVPKGLQGYTEYNIVKYEYNLTKAMEIIDQLK
QRGFDPSKYTIEIAYNQGNTARQQIAAMLQNAWSQLGFRVIVNTYNWPQYLDKVDNFNFD
VALLGWIPDYLDPDNYLMPFVWGGAEFTEINYYKASSPNDVSNYVSRVERVIDTEKYIVV
VGPKGSGASYTGPANKPILVVNYVLDEEATMKNWEKPVSMVTIGAPGWKDIPVSALVKIS
RTVLDPDIREAVINAAVIVFNNESPMIMLGQQVGERNYGSWVYNMYYPLSAFARYDLMWE
DPNAPVVDTGVSGIRNDPNTMVIATIGWPDTFDPAKSYESFGWEIFWQIYSRPITYYYEN
TEPEPELAVAWAFSSDATDLYLVIRGGVQAYDPWNNKTYPIDATDVLFSIWRVARTNLPG
GPSWMVSDFIDVNASQVLTEDEFKQVVSNGLSTVYHGQSKTVKSLDELLGFFNYSGQTAG
VVKLKLKFPYPPILHVLTTAVGCVIPMEYALGNQYQQALADSNNGKNPAAWAKYVLEGED
DPTYKLLKDKPVSTGPYYVADYKEDSYILLKLNPYYWNATVWYELYGFKP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagctctaagtagaaccgttgcaatactccttattctaatagtcgtaatagct
atcggcataggagcttattattggagtagcatgcagcagccaacccaggtcattaagccc
actaagcctatccacacccaggtactttacttgatatctaatgatgagaataccaggatt
caattgtatcaatcaggcacggttgatatagctgctgtaacacctagtaggtggagggat
ataaataatacgccggtaggaaactttaagcttgtactagccttcgatccaagcaggccc
atgttgacaatacagcatgtaatcctcaacactatgagggagccgtttaatataacagag
gtgaggcaggctcttgcatgggctacaccttatcaggctatattagaccaagtgttcagc
gggctctacacgaggttatatacaatagtgcctaaggggttacagggatacaccgagtat
aatattgttaagtacgagtataatttaaccaaggccatggagataatagatcaattaaag
cagagaggcttcgatccctccaagtacacgatagaaatagcgtacaaccagggtaacaca
gcgaggcagcagatagctgcaatgctacagaacgcgtggagccaattaggctttagagta
atagttaacacatataactggccccagtatctcgataaagtagataacttcaacttcgat
gttgcattactaggctggatcccagactacctcgacccagataactacttgatgccattc
gtatggggtggtgccgagttcactgagatcaattactataaggcttcatcacccaacgat
gtatccaactacgtttccagggttgaaagggttatagacacggagaaatacattgttgta
gtaggtccgaagggtagtggggcatcatatactggtccagcaaacaagccaatactagtg
gtcaactatgtgctggatgaggaggcaaccatgaagaactgggagaaaccagtatcaatg
gtgactataggtgcgcctggctggaaggatatacctgtaagcgcgttagtgaagatctcg
agaacagtgcttgacccagatattagggaggctgtaatcaatgccgccgtaatagtattc
aataacgagtccccgatgataatgctagggcagcaggttggagaacgcaattatggatca
tgggtctacaacatgtactacccgctttcagcgtttgccagatacgacctgatgtgggaa
gaccctaatgcaccagtggttgacacgggtgtatcagggataaggaacgaccctaacact
atggttattgctactattggatggccggatacatttgacccagctaagtcctacgagtcg
tttggatgggagatattctggcagatatacagtaggccaataacatactactatgaaaac
acggagcccgagccagagctagccgtggcatgggcgttcagtagtgacgccactgatcta
taccttgttataaggggcggtgtacaggcttacgatccatggaacaataagacataccca
atagatgcaaccgacgtcctattcagtatttggagagtggctaggacaaacctgcctgga
ggtccatcctggatggtctcggacttcatagatgtgaatgcgtcacaggtgctaaccgag
gacgagtttaagcaggtggtaagcaatggcttgtcaaccgtatatcatgggcagtcgaag
accgttaaaagccttgatgaactactaggtttcttcaattattctggtcagacagctggg
gtcgtcaagttaaagctgaagttcccgtatccacctatactccacgtattgacaacggct
gtgggatgcgttataccgatggagtacgccctaggaaaccaataccagcaggcactagcc
gacagtaataatggtaagaaccctgcggcgtgggccaagtacgttcttgaaggtgaagat
gaccccacttacaagctattaaaggataaaccggtgagcaccggtccatactacgtagcc
gactacaaggaagacagctacatactattaaaacttaacccatactactggaatgcgaca
gtatggtatgagctctacggcttcaaaccatag
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