Desulfurococcus amylolyticus DSM 16532: Desfe_0712
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Entry
Desfe_0712 CDS
T02136
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfd03400
]
Desfe_0712
DNA repair and recombination proteins [BR:
dfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desfe_0712
Archaeal homologous recombinant proteins
Desfe_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_21
AAA_29
MscS_porin
DUF1664
Laminin_II
Rad50_zn_hook
SbcC_Walker_B
zf-C4H2
DUF3450
BRE1
ABC_tran_CTD
NACHT
ABC_tran
ATG17_like
AAA_16
DUF4200
AAA_22
DUF6276
ResIII
EzrA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFL66611
UniProt:
I3XRN7
LinkDB
All DBs
Position
complement(679786..682242)
Genome browser
AA seq
818 aa
AA seq
DB search
MRIYGLMLENIRSFKNEYIVFPKKGVTVIHGETGSGKTSILMSISAALFGLQKEGKDPFR
AFAYPTGKDLLRADALRGRIRLLFEHEGRVYLVEREFKRSSNSVVNVDRNRLEEYIIKED
KLIKVSSLVLGTEELNKRIREILGIKEGAREKPLLFTSVLYAPQFNIHEILSLDSEERGE
IIERSLGLYKYKEYKKNSDVVRDIIKDKIDELTDKINELKKKLKDKNKEKLLEEKQRLER
QLKELEKILVERQKERDELDKRIKEHQNRLREIERRIGELQSRIEQARKQEARLRDVRNE
LAKIALDLGKNASTSYTELLEELGRREREIEGKVRELQDIESELVDKRKEIEEELNKAKR
KREDIMMMLGRLEADEENLTRQEQELNKQLEKYRDLLNKGICPLCLQPIPHEHGVKLIDE
VQGRLEEVGKKIRELKEEETSRYKELEDINKRINALEENRGEVEEKLNKVRRDSTRLLQE
LLSLKHTAEKINSLVDEASRIEKEISEARSLEEELARINGEKENTISIIHGLEDKYREVK
EKLEGLIAEKAGTEKSIKYIESEIQDIEKEEDELRQLEDEKKFHEWMNTTMNILDKLVDE
VEKRVSLEMVSEFRRIFYMILNTLLQGQPVEVGIRDDFTIEPKIRIGGRIYTISSLSGGQ
NIAISLAYRLALNATVRTYSPFLRKTVLILDEPTTGFSQELVKRLSEVLRKIGDLEGQVI
VVTHDELLKEIGDCKIMLERDPINHVSKVREQECDIEEFNKFRNLVEGLLRGSLQVDTVK
MEKIEVEPAGFKPEVRLGAGTVQQAKRKSLFDFRDKSK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttatggattaatgcttgaaaatatacggagctttaagaacgagtacatagtg
ttcccgaagaaaggggtaaccgttatacatggcgagacaggaagtggtaaaacaagcata
ctcatgtctataagtgcagcattatttgggctccaaaaagagggtaaggatccatttagg
gcatttgcatatccgacaggtaaagacctattgagggctgatgcattaaggggtaggata
cgactcttattcgagcatgaaggcagggtataccttgttgaaagagaattcaagagaagt
agtaacagcgtggttaatgttgaccggaataggctcgaagaatacatcataaaggaagat
aagttgatcaaagtaagcagcctggttctcggaacagaagaattgaacaagagaatccgg
gagatcctcgggatcaaagagggggccagggagaaaccactcctattcacaagcgtgctc
tacgccccccaattcaacatacatgaaattctcagtctagatagcgaggagagaggcgag
atcatagagagatccctgggactatacaagtataaggagtacaagaagaatagcgatgta
gtaagagacataattaaggataaaatagatgaattaaccgataaaatcaatgagctgaag
aaaaagcttaaagacaaaaacaaggagaaactgctcgaagagaaacagagattagaaagg
cagttaaaagagcttgaaaaaatactcgtggagaggcaaaaagagcgtgatgagctagat
aaaagaataaaggagcatcagaatcgccttagggaaatagagcgaagaataggcgagtta
cagagtaggatagagcaagctaggaaacaagaggctaggctgagagatgtgagaaatgaa
ctagctaaaatagcacttgatctaggcaagaatgcttcgactagttatacagagctacta
gaagaattagggagaagagaaagagaaatagaggggaaagtaagggagcttcaagacata
gaatctgagctagtagataagcgtaaggaaattgaggaggaattaaacaaggctaagaga
aaaagggaagatataatgatgatgcttgggaggcttgaagccgacgaggaaaaccttaca
agacaagaacaagagttaaataagcaactcgaaaaatacagggatctcttaaacaagggg
atatgccccctatgcctccagccgataccccatgaacatggtgttaaactaattgatgaa
gtccaagggagattagaggaagtagggaaaaagataagggagctaaaggaagaagaaact
agtcgctataaggaattagaggatatcaataagaggatcaatgctctcgaggaaaaccgg
ggggaagtagaggaaaaactgaataaagtgagaagagattcaacaagacttttacaggaa
ttgctaagtcttaagcacactgctgaaaaaataaatagcctggtagatgaggcttcaaga
atagaaaaggagatctccgaggctagaagcctggaagaagaattagccagaatcaatggt
gagaaagaaaacactataagcatcatacatggactcgaagacaagtaccgtgaagtcaag
gaaaaactggagggattaattgctgaaaaagctgggactgagaaatcaattaagtacatt
gaatcagagatacaagacattgagaaagaagaggatgaactgagacaactcgaggatgag
aagaaattccatgaatggatgaacacgacgatgaatatactagataaattagtcgacgag
gttgaaaaaagagtctcactagagatggtctcggaattccgaaggatcttctatatgata
ctaaatacattattacaggggcaaccagtagaagtaggcataagagacgacttcacaata
gagccgaaaataaggataggtggtagaatctacactatatcatcactcagcggtgggcaa
aacatagccatcagcctagcatacaggctcgccttaaacgctacagtaagaacatactcg
ccattcctgaggaaaaccgtcctaatactagatgagccaacaacaggcttcagccaggag
ctcgttaaaaggcttagtgaggtactacgtaaaataggggatctagaaggacaagtaata
gtcgtaacacatgatgaattattgaaagaaataggagattgcaagataatgctagaacgc
gatcccataaaccatgtctctaaggtacgggaacaggagtgtgatatagaggagttcaat
aaattcaggaacctggtcgaaggcctcttacgcggctcactacaggtagatactgtgaaa
atggagaagatagaggtggagccagcaggcttcaagccggaagtaaggttaggagctgga
actgttcagcaagccaagagaaaaagcttgtttgacttccgcgataaatctaagtag
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