Desulfurococcus amylolyticus DSM 16532: Desfe_1123
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Entry
Desfe_1123 CDS
T02136
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd03410
Base excision repair
dfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desfe_1123
03430 Mismatch repair
Desfe_1123
03440 Homologous recombination
Desfe_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfd03400
]
Desfe_1123
DNA repair and recombination proteins [BR:
dfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Desfe_1123
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Desfe_1123
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Desfe_1123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AFL66995
UniProt:
I3XSS1
LinkDB
All DBs
Position
1071764..1072741
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AA seq
325 aa
AA seq
DB search
MPRRVILVHGDSDGVASGALAYNFYKAREEPVVFFTHPVGLLGDLKEFTRNGDNIFIADI
ALNEVHAEEVLRLLEERGRYGEVVYIDHHPEPLNTRLNGMDRVNVYHNTCCSASELTYIF
LHERGLDPEYSRIALYGAIGDYLDETQWVKRTLTEWDKRSIYLEAGIVIQALEGTRRDYE
FKRGIVEYLSRNSLPSSNPVIVERGLEQAKRDEELRVWVKENVHVYGAIGYVVNPPGSIG
KAANYARVYGGTRVGIAIEERGDTYVMSLRGDNTIDLNRVLRIMSRELPVMGGGHPFAAG
ARVKKEFFNEFLVRLDEAIKGFSQQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggcgcgtgatacttgttcatggcgacagtgatggtgtagcctcgggggcgttg
gcctataatttctacaaggctagggaggaaccagtagtctttttcacacacccggttgga
ctactaggggatctcaaggagttcacgaggaacggcgacaacatatttattgctgacata
gccttgaacgaggtgcatgctgaggaggtcctgagactactcgaggagagaggaagatat
ggtgaagtcgtttacatagatcaccacccggagcccctcaataccaggcttaatggcatg
gatagggttaacgtatatcataatacttgttgctccgcctctgaattgacatatatattc
cttcacgagaggggactagacccggaatactctcggatagcactatacggagccataggc
gactatctcgatgaaacccaatgggttaaaagaacgctgaccgagtgggataagagatcc
atatacctcgaggcaggcatagtaattcaggccttagagggaacccggcgtgactatgag
ttcaaacggggaatcgtagagtatttatctagaaatagccttccaagcagtaatccagtt
attgttgaaagagggttggagcaggctaaacgggatgaagagctacgggtatgggtcaag
gagaatgtccatgtctatggagcaatagggtatgtcgtaaaccctcctggaagcattggt
aaagctgccaactatgcgagggtatatgggggtacacgggtaggtatagccattgaggaa
cggggcgatacatatgtaatgagtctgcggggagataacaccattgatttaaacagggtt
ctcagaatcatgtcgagggagcttcctgtcatgggtggtggacacccgttcgctgcaggg
gccagggttaaaaaagagtttttcaacgagtttctcgtcaggctcgatgaagccattaaa
ggcttttcacaacagtga
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integrated database retrieval system
