Desulfurococcus amylolyticus DSM 16532: Desfe_1191
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Entry
Desfe_1191 CDS
T02136
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfd03016
]
Desfe_1191
Enzymes [BR:
dfd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Desfe_1191
Transfer RNA biogenesis [BR:
dfd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desfe_1191
Prokaryotic type
Desfe_1191
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFL67061
UniProt:
I3XSY7
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All DBs
Position
complement(1136998..1138110)
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AA seq
370 aa
AA seq
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MDSDTGRIYPHPLDYVSGLKYSLTSLSVNHEYRITPSSFIVREVIDEGYLVKRVDLHDRE
GYIVVRVVKRGLDTFEALRILSRKLDIPVENIYFHGLKDKNATTTSYFYIKRLLVDEKIF
PIQGDKVVFEIAGYTRFKPRREIFKGNEFEVLIQGLDERQQEVMKGILELISRHGLPAYY
GYQRFGVKRYNTHLLGKYVVKRREDCFSRILLDTMYPGEDLEAIVKRIRRDFTSFYYEGR
YVRAGYNGLGLKNVLRALNEIIIDAYAGYLYNLLLNKIIEEKGFVDLDKEYPMPGCIESI
ELYSDIFSEEGLTLEEVRGLPCYYRNGLFKPLNTRMSCAGDVCRLVFMLEPGLYATIVLR
ELFKEKLVLN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacaccggacggatatatccacatccattggactacgtgtccgggttgaaa
tattctttaacaagcctctcggtgaaccatgaatatagaataacgccttcaagctttata
gttcgtgaagtcattgatgaaggatacctggttaaaagagtggatctccatgatagggaa
ggatatattgttgtaagggttgtaaagaggggtctcgataccttcgaggccctaagaata
ctctcgaggaagctagatatcccggttgagaatatatatttccatggattaaaggataag
aacgcaactaccacttcatacttctacattaagagactgctggtggatgagaagattttc
cctatacagggggacaaagtggttttcgagatagctggatacacgaggtttaagccgcgc
agggaaatattcaagggcaatgagttcgaggtactcatccaaggccttgatgaacgtcag
caagaagtcatgaaagggattctcgagctgatcagtaggcatgggctcccagcctactat
ggataccagagatttggtgtaaagaggtataatacacatttactaggtaaatacgtcgta
aaaagacgtgaggattgtttctcaagaattcttcttgataccatgtatcctggggaggat
ttggaagccatagtaaaaaggataaggagggatttcaccagcttctactatgagggtaga
tatgttagggctggatacaacggcttagggttgaagaatgttctcagggctcttaacgag
ataattattgatgcgtacgccggatacctgtataacttattactcaataagataattgag
gagaagggattcgtggacctcgataaggaataccctatgcccggctgtattgaaagcatt
gaattatatagtgatatattcagcgaggaagggctcacgctagaggaggtgaggggtctt
ccctgctattataggaatgggttattcaagccgttgaacacacggatgtcttgtgctggt
gatgtatgtagattagtgtttatgttggaacctgggttatacgctacgattgtattgagg
gagttatttaaggagaagctagtcttaaactag
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