KEGG   Desulfurococcus amylolyticus DSM 16532: Desfe_1291
Entry
Desfe_1291        CDS       T02136                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dfd  Desulfurococcus amylolyticus DSM 16532
Brite
KEGG Orthology (KO) [BR:dfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfd03400]
    Desfe_1291
Enzymes [BR:dfd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desfe_1291
    5.6.2.6  RNA 3'-5' helicase
     Desfe_1291
DNA repair and recombination proteins [BR:dfd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Desfe_1291
SSDB
Motif
Pfam: DEAD Helicase_C WH_Lhr DEAD_assoc ResIII Cas3-like_C_2 UvrD-helicase AAA_19 T4SS-DNA_transf zf-HIT
Other DBs
NCBI-ProteinID: AFL67159
UniProt: I3XT85
LinkDB
Position
complement(1218360..1221158)
AA seq 932 aa
MSGIVECIRKLGYKSFTELQKKAFNKVAGEGRSVLILAPTGSGKTEAAVIPVFYRVRVER
LKPIAVIYITPLRALNRDIEGRIKKIASCFGLSVAVRHGDTPERARRELADNPPHVLITT
PESFAYIIVNEKLRHYIANTRYLIIDEFHEMVRSKRGLLFLTILYLLGEYHGFKPLRIAL
SATLSNPSEYLKLLTPMGEDVEVIGDEYVKKMDVKVVVPGKPSSLSLLGDDSVDPRLSYI
LDAGRRYNGVLVFTNTRSLAEMLGSLLRKLIEKHGLDLKVGVHHGSLSRSRREEAEAGFK
QGELNILVATSSMELGIDIGHIDFVIQYLSPRQSSRLIQRIGRSGHRLEGISRGVVLSTG
NLLHLLESLILVDEALRNKVEREEVIFKPLDVLAYAIALLVLLNPSGVNRDELYDRLVGH
ALYRDLSPEEYNRLIEYMVYAHVLRDDGGLLKPTRKTRLYVYRTSMIPSTRDIHVVEVST
GRTIGSLNEEYVILRLRPDDVIILAGEAWRVIGFDDEKGHLYVEKTKGDYAESLIPHWEG
ENIPVDTRVALRIGEVIDYVKKNKSLPEELKKLLETNVEIPWGLAEELSGYSRIYVDYVE
KMNLLIININAGSKVNSLIRDVITYLLRQRFPIVDFTSYSSPYAVLVRVKGYIYPAELIN
TVKTIIINLGKYIDNNVFLRSIVKDSQALYWRIYQVAQRFGAITPGETRVTRSMLNALAD
TIIGEEAFKEVLIKDYDLESARSIASLITGGGISVETRVYDDLARHHLEILGYIELPIRK
DVVNIDISQYLERLLERELTLLCIKCGYIKQGKVRELLELGKYSCPRCGLATLTIIKGDI
EEEKSIIEKLGRGMELKGGERRLLDDLAKRAVILYKFGKQALLVFAGRGVGTSEAVRILN
NASRGADLVREIYEREKTFLRVKKYIDSKDDK
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgagcggtattgtagaatgcatcaggaagctgggatacaagagtttcacagagcttcag
aaaaaagcttttaacaaggtagctggggaaggcaggtcagtgttaatactggctccaacc
ggtagtggtaaaacagaggctgctgtgataccggttttctacagggttagagttgaaaga
ctgaaacccatcgcggtaatctacattacccccctaagggctttaaacagggatattgag
gggagaatcaagaagattgcatcctgcttcgggcttagcgtcgcagtaaggcatggcgat
acgcctgagagggcgcgcagggagctagctgataacccgccccatgtattaatcaccacg
ccagagtcattcgcgtacataattgtcaacgagaagctccgccactacatcgctaacaca
aggtacttgataatcgatgaattccatgaaatggtgaggagtaagcgtggactattattc
ctgacgatactatacctactcggggagtaccatggcttcaaaccattaaggatagcgcta
tctgcaaccctctccaaccctagtgagtaccttaaactgttgacccctatgggtgaagat
gtagaggtcatcggggatgaatacgttaagaagatggatgtaaaggttgtagtacccggt
aaacccagctcgctgagtctactgggtgacgactccgttgaccctaggttatcctatata
ctggatgctgggagaaggtataatggggtattggttttcacgaacacgcgctcgcttgcg
gaaatgcttggttccctactgaggaaacttatcgagaagcatggtttagacctcaaggtg
ggtgtgcatcatggtagtttatcccgtagtcgcagggaggaggctgaggctggatttaaa
caaggagaattgaatatattggttgctacatcgagtatggagctcggtatagatatcggg
cacatagacttcgttatccagtatttatcacctaggcagtcctcgaggcttattcaaagg
attgggagaagcgggcacaggcttgaaggcatcagccgtggtgtagtgttgagcacgggc
aatctattacacctattggaatccctgatcctcgttgacgaggctttgagaaataaagtg
gagagggaagaggtgatatttaaaccgcttgatgtcctagcatacgccatagcactacta
gtcctcttgaatcctagtggcgtcaacagggatgaactatatgataggttggtgggacat
gctctataccgtgatctatccccagaggaatacaataggctaatcgagtacatggtttac
gcacacgtcttaagggatgatggaggattacttaagcccactagaaagactaggctctat
gtctataggacatcgatgatcccttctacaagggacatccatgttgtagaggtttcaaca
ggtaggaccataggctccctaaacgaggaatacgttatactgaggcttaggccggatgac
gtgatcattctagcaggggaggcatggagggtaataggatttgatgatgaaaaagggcat
ctctatgttgagaaaacaaagggcgactacgctgagtcgctcataccacactgggaaggc
gagaatataccggttgacacgcgtgtagcgttgagaatcggtgaggtaatagattatgta
aagaagaataagagcctcccagaagagcttaagaagctgttggagactaatgtggagata
ccttggggcctcgccgaggaattgagcgggtatagcaggatatatgtcgactatgtggag
aaaatgaatctcctcatcataaatattaatgctggaagcaaggtgaatagtttaatacgc
gacgtcatcacgtatctgcttagacagagattccccatcgtggatttcacatcgtactcc
tccccctatgctgtcttggtgagggtgaaaggctatatatacccggctgaattgatcaac
actgttaaaacaataatcataaacctggggaaatacatcgacaacaacgtgtttctaagg
agtattgtgaaggatagccaggcattatactggaggatataccaggttgcccagagattt
ggagctataacgcctggggagaccagggtgacgaggtccatgcttaatgcattggctgac
accattataggtgaggaagcatttaaggaagtccttataaaggattatgacttagagtcg
gctaggagcatagcttcattaattaccgggggaggcataagtgttgaaaccagggtctac
gatgacctagctagacaccacttggagatacttgggtatattgagctacctattaggaag
gatgttgtaaacatagatatatcccagtacttggagagactccttgagagagagctaaca
ctactatgcattaaatgcgggtacatcaagcaaggcaaggtgagggagttactcgagtta
ggtaaatattcgtgtcccagatgcggccttgccacgttaaccattattaaaggagatata
gaggaggagaaaagcattattgaaaagctggggagagggatggaattgaagggtggcgaa
cgccgcctcttagatgacctcgccaagagagcggttatactttataaattcggtaagcaa
gccctcctggttttcgctggaagaggagtgggaaccagtgaggccgtaagaatacttaac
aatgcctcaaggggcgcagatttagttagagagatatatgagagggagaagacattccta
cgggttaagaaatatattgacagcaaggatgataagtag

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