Dyadobacter fermentans: Dfer_0301
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Entry
Dfer_0301 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_0301
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_0301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACT91571
UniProt:
C6VY92
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All DBs
Position
342412..344292
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AA seq
626 aa
AA seq
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MKLSYKNWIFLAALATTGLVSCDTDFLDVTPPTEIPTEEVWKDGALAEGFVTGIYQGLQQ
GGFSEQMLASLTDEAVFTHTGRNINTINEGSLSPSNLGWVDDTYGWSPMYSRIRATNQAI
QELPTSTFADQTLKDRLKGEAHFLRAYYYQQLLRYYGSVPLITKVYELNEDYSVPRNTWE
ECVNFIAADCDSAAALLKGKTEQKGRATEVAALALKSRVLLYAASDLHDVATAKAKSAVL
AGYTNPEFFGYTSGDRKARWQAAQTAAKAAMDAKAGYKLNLTAPVTPEQGKINYISIAMA
GYSADKSLDAAGGEDVIFGRYFTPSQTSDGARQTGLNNGPNGYHNWAGNTPIGLLVDDYE
MMDGTKFSWTNPTHKASPYVNRDPRFYATVMYDGAPWKPRPSDAKDPANQIQTGSYDLLD
DKGALFNRKGLDTRSSTIEDWNGSRTGYYMRKFIDPNPALYDNTDRQNIPWPFIRVTEVA
FNYIEASIELGQDAVALDLLNKIRFRAGMPALKVSGTALRDAYRHERRIEMAYEEQRYHD
ARRWMIAPTTLGRPLQFITVIGKFKPGKSMREPYHYDPTVYDYTYTPTEDKSHENRTWVD
KMYFRPFSRDEINRNAKLVQNPGYDK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagttataaaaattggatttttctggcggcgctggcaacaaccgggctggtg
tcgtgtgacactgactttctggatgtaacgccgcccaccgaaatcccgaccgaagaggtt
tggaaagacggtgccctggccgaaggttttgtgacgggcatttaccagggattgcagcag
ggcggattcagcgagcaaatgctggcgtcgctcactgatgaggctgtatttacccacaca
ggccgcaatatcaacacgatcaacgaaggaagtttgagcccttccaacctgggctgggtg
gatgatacctacggatggagcccgatgtactcccgcatccgcgccactaaccaggcgatc
caggagctgccgacttcgactttcgcggatcaaaccctgaaagaccgattgaaaggcgag
gcgcacttcctgcgtgcatattactaccagcagcttctccgctactacggctccgttccg
ctcatcacgaaagtatacgagctgaacgaggactattcagtgcctcgtaacacatgggaa
gaatgtgtgaacttcattgcggccgactgcgacagcgctgctgcattgctgaaaggcaaa
accgagcagaaaggccgtgctacggaagtggctgcattggcattgaaatcacgcgtgctg
ctttacgctgcgagcgacctgcacgatgtggctaccgcaaaagcaaaatctgctgtgctg
gccgggtataccaatcctgaattcttcggctacacttccggcgaccgaaaggcgcgctgg
caggctgcgcaaactgctgctaaggctgcaatggatgccaaagcaggttataaactgaac
ctgaccgcgccggtaacacctgagcaaggcaagatcaactacatttcaatcgcgatggcg
ggttacagcgccgacaagtctctcgacgctgccggcggtgaggatgtgatcttcggacgt
tatttcacgccgagccaaacctccgacggtgcacgtcagaccggtttgaacaacggtccg
aacggctaccacaactgggcgggtaacacgccgataggcttgctggtggacgactacgaa
atgatggacggaacgaagttctcgtggaccaacccgacccacaaagccagcccgtatgtg
aaccgcgacccgcgtttctatgcaacggtcatgtacgacggtgcgccctggaagccacgt
ccatccgacgcgaaagaccctgctaaccagatccaaaccggctcatacgacctgttggat
gacaaaggggcgctcttcaaccgcaaaggactggatacccgcagcagcacgatcgaagac
tggaacggaagccgcacaggctattacatgcgcaagttcatcgacccgaaccctgcattg
tatgacaacaccgaccgccagaacatcccttggccgttcatccgcgtaaccgaggtggcg
ttcaactacatcgaggcgagcatcgagcttggccaggatgcggtagcgcttgacctgctg
aacaaaatccgtttccgcgccgggatgcctgcattgaaagtttcaggcactgcattgcgt
gatgcttaccgtcacgaaagacgcattgaaatggcctacgaagagcagcgctaccacgat
gcacgccgctggatgatcgcgcctaccacactgggccgtccgttgcaattcatcaccgtg
atcggcaaattcaagccaggcaagtcgatgagggagccgtaccactacgatccgaccgtg
tacgactatacttacacgccgacggaggacaaatcgcacgaaaaccgcacttgggtggat
aaaatgtacttccgcccattcagccgcgatgaaataaaccgtaatgcgaagctggttcag
aacccgggctacgataagtaa
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