Dyadobacter fermentans: Dfer_0322
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Entry
Dfer_0322 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_0322
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_4
TPR_14
TPR_6
TPR_12
SusD-like
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ACT91592
UniProt:
C6VYB3
LinkDB
All DBs
Position
370276..371880
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AA seq
534 aa
AA seq
DB search
MHLTNMKIHIKLSAMLLALLGVTSCKDNLEESPYSSLGKDVAFKDEDGLNQATIGVYQAW
TTTDHSDIFNRFILAESGHRYATAGILGSGADPYYRFGHNAVSGAFESVWTRFYKIIYRA
NTVIDNAKMAVPGEEEEADPYIAEARVLRAYAYFNLVRLFGGVPLILREVKSFEDEDLIF
AGKATEAEVYDAILADLTFAETILPDSRGGAELGRVSAGTVKALMGKVYLTMAGKPLNRT
ENYQKAAAKLSELVGAANEETYDMELLPNFADVFAIANERNREIVLSFGYFVNPSNQNGN
ILPFHLFPSGLVNGDEQTNYGLTYDFYKLYEKTDTRRDFTLVSKYAFTGGARAGAQEGDS
IVYDAASSHYMNLRTKQPFAHDDFKYGIAFGKLAREARAPGAPVQGYNADLIELRFSDVL
LMLAEALVETGKPAEALPLLNRVRARAKAAPSKATAVPALRAAIRNERRLELSGEFNTVF
DIRRWGTLQEEIGAMSEDQIVDNILIPYTPRLELYPIPQSQLDANPNLRQNDGW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgacaaacatgaaaatacatatcaagctatccgcaatgctgctggctttgctg
ggcgttacctcgtgcaaggataatctggaagaatcgccgtactcgtcgttgggcaaagat
gtggctttcaaggacgaggatggcctcaaccaggcgaccatcggcgtgtaccaggcctgg
accaccaccgatcattccgatatattcaaccgtttcatcctggccgaatcgggccaccgg
tatgcgacggcgggcattctcggttccggcgcagacccttactaccgcttcgggcacaac
gctgtttcgggtgcattcgaatccgtgtggacgcgcttttataagatcatttaccgcgct
aacaccgtgatcgacaacgcgaaaatggctgtcccgggcgaggaggaagaggctgatccg
tacattgccgaagcgcgtgtgctgcgtgcttatgcttatttcaacctggtaaggctgttc
ggcggcgtgccgctgatcctgagagaagtgaagtcgtttgaagacgaagatctcattttc
gcaggaaaggccaccgaggcggaggtgtacgacgccattcttgccgacctcacattcgcc
gaaaccatcctgcccgactcgcgcggcggtgcagagctcggccgggtgtccgcaggaacc
gtgaaagccctcatgggcaaggtgtacctcaccatggccggaaagccattgaaccgcacc
gaaaactaccagaaagccgccgccaagctgagcgagctggtgggagcggccaatgaggaa
acttacgatatggagctgcttcccaatttcgcggacgtgttcgcgatcgccaacgagcgt
aacagggagatcgttctgtcattcggatattttgtaaatccgtctaaccagaatggcaac
atccttccttttcacctgttcccgtcgggcctggtaaacggcgacgagcagaccaactac
ggtttgacttatgatttttacaaattgtacgaaaaaaccgatacgcgccgggatttcacg
ctggtgtcgaaatacgcattcaccggtggcgcccgagcgggagcgcaggaaggcgatagc
attgtgtacgacgctgccagcagccattatatgaacctccgcaccaagcagccattcgcg
cacgacgatttcaaatacggcattgctttcgggaagctggcccgcgaagcccgtgctcct
ggagcgcctgtacagggttacaatgccgacctgatcgaactcaggttctcggatgtgctg
ctcatgctggccgaggcattggtagaaaccggcaaacctgccgaggcattgccattgctc
aaccgggtgcgcgcgcgcgcgaaagccgcgccgtccaaagcaaccgctgtgcccgcattg
cgtgcggcgatccgtaacgagcgcaggctggaactgagcggggagttcaataccgtgttc
gatatccgccggtggggtacattgcaggaagagataggggcaatgtccgaagatcagatc
gtggataatatattgatcccctacacaccccgcctggaattgtacccgattccccagtcg
cagctcgatgcgaacccgaatctgcggcagaacgacggctggtag
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