Dyadobacter fermentans: Dfer_0558
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Entry
Dfer_0558 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K02014
iron complex outermembrane recepter protein
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_0558
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_0558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
fn3_3
EMC7_beta-sandw
CooC_C
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
ACT91823
UniProt:
C6W089
LinkDB
All DBs
Position
complement(625279..627732)
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AA seq
817 aa
AA seq
DB search
MKDLPRRSLLLLTRPSLCALLTAVLPFSGQVAWAQQSAPDKKVKQTTTQSVPKTGKGSVK
GKVQTPDGKPVEFANVVVKGTGKGTQTDEKGAFTINDIPEGEHSLLVQHLGFTSADLPFT
VETGEQTVLEAITVQEGDKNLNEVVVSAGRVRESLNSVPASIAVLKAKEIQEQATINNSI
AAILGNTIPGLGMPNNKATNTGQTLRGRSLLVLVDGIPQSTPLMNGNRDIRSIDPAVLER
VEVVKGATAIYGNGAGGGLINYITRKPTENKAIAGITQLGMHGNLFHMADTPGYRISQML
EGKINKFSYVVSGLLDRTGVYKDGAGDVISTSNGLGETRLYNAYTKLFYDFNADNELEFS
FNLFSSRQYTKYVNKPGVYGETPTIAVPGDSPGDAEGTPFNYNFSLRYLRRGLWAKTSMD
ITAYLNGFESMNAYTASTSGWYGPGQTQITSRKKGLRANFYTPFNVSPNFGGGVTYGIDI
LGDVTNQVLTDGRVYVPDMNMTSIAPYAQVKLDIVKDLTLKTGARFENIGIDVKDYSTLA
KGPNGEGAVAVKGGKLDYKALNLNAGLRYSKYSLFNPFFNFSQAFGISELGRILRSATTN
TIANLNTKPIIVNNYEAGFSSQYKFVQFTAAYFISTSKLGADMVTVNGVMTPLRLPEEIK
GYEFTLDFQPSDKLSFGGSYSYVEGKADQNDNGHFDDPEDRYLTGARITPPKATAFIKYQ
PTDKLNLNLFWVYSGNRKRFDKQANGRYGNGEGPVDAYDLFNLNASYVFSKHIRAAVGIE
NLLNKTYFNTVNLFSGQDLEYTRGNGSRFSLNVYYNF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaccaagacgctccctcctattacttacccgaccgtcgctctgcgcgtta
ctcacggccgtgctaccgttttcggggcaggttgcgtgggcacagcagtcggcgccggac
aaaaaagtgaaacaaactaccacccagtcggtgccgaaaaccggcaagggctcggtgaaa
ggcaaggtgcaaacgcctgacggcaagccggtggaatttgccaatgtggttgtaaaaggc
accggcaagggcactcaaaccgatgaaaagggcgcatttaccattaacgacatccccgaa
ggcgagcatagcctgctggtgcagcacctcgggttcacctccgccgatctgccatttacg
gtagaaaccggcgagcaaacggtgctggaagctattaccgtgcaggaaggagacaaaaac
ctgaatgaagtggtggtttcagccggccgcgtgcgcgagagcctcaattccgtgcccgcg
tcgattgccgtgctgaaagcgaaggaaatccaggaacaggcgacgatcaacaactccatc
gcggcgattttgggcaataccattccggggctgggaatgccgaataacaaggcgaccaac
accggccaaacgctgcgcggaaggagcctcctggtgctcgtggacggcattccgcagtcg
acgccgctcatgaacggtaaccgcgacatccgctccatcgaccctgccgtgctggaacgc
gtagaggtcgtgaaaggcgcgacggccatttatggcaacggcgccggcggcgggctgatc
aactacattacccggaaaccgaccgagaataaagcgatcgccggcatcacgcagctcggc
atgcatggcaatctgttccacatggccgatacgccgggctaccgcatttcgcagatgctg
gaaggaaagatcaacaagttttcctacgttgtgagcggcctgctcgaccgcaccggtgtg
tacaaagacggtgccggcgatgtgatctcaacgtccaatggattgggtgaaacgaggctt
tacaatgcctacacgaagcttttctatgacttcaatgccgataatgagctggaattctcg
ttcaacctgttcagcagccggcagtataccaaatacgtgaacaaaccgggcgtttatggc
gaaacaccgactatcgccgtgccgggcgacagtccgggcgacgcggaaggcacgccattc
aactacaacttttcgcttcgttacctgcgtcgcgggctttgggcaaaaaccagtatggac
attaccgcctacctgaacggtttcgaatcaatgaacgcctacacggcctccacatcgggc
tggtatggccccgggcaaacgcagatcacatcgcgcaaaaaagggctccgggccaacttt
tacacgccattcaatgtcagcccgaacttcggcggcggcgttacctacgggatcgacatc
ctgggcgacgtgacgaaccaggtgctcaccgacggtcgcgtgtatgtgcccgacatgaac
atgacgagcattgcgccttacgcacaggtgaagctggacatcgtcaaagaccttaccctg
aaaaccggtgcgcggtttgaaaacatcggcattgatgtgaaagattacagcacgcttgcc
aaggggcccaacggcgagggtgccgtggccgtgaagggcgggaaactggactacaaggca
ttgaacctgaatgcaggcttgcgttactcgaaatacagccttttcaacccgttctttaac
ttttcacaggcattcgggatcagcgagctggggcgcatcctccgctcggccacgaccaac
acgatcgccaacctgaacacgaagccgattatcgtcaataactatgaggccgggttcagc
agccagtacaaattcgtgcagtttacagcggcctattttatcagtacttccaaactcggc
gccgatatggtgaccgtgaatggcgtgatgaccccgctccgcttgccggaggaaatcaaa
ggctatgaattcacactcgatttccaaccgtctgacaaattatcgttcggcggaagctac
tcgtatgtggaaggcaaagccgaccagaacgacaacggccatttcgacgacccggaagac
cgctacctcaccggcgcgcgcattaccccgccaaaagcaactgcatttatcaaataccag
ccgacagacaagcttaacctgaaccttttttgggtatattcgggtaaccgcaagcgattc
gacaagcaagccaacggccgctacggtaacggcgaaggcccggtagatgcctacgatctt
tttaacctgaatgcctcgtacgtgttcagcaagcacattcgtgcggctgtgggtatcgaa
aatcttctgaacaagacttatttcaacacggtgaacctgttcagcggacaggacctggaa
tacacccgaggtaatgggtcccggtttagtttgaatgtgtattacaatttttaa
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