Dyadobacter fermentans: Dfer_0714
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Entry
Dfer_0714 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_0714
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_0714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
STN
FecR_C
CILP
Motif
Other DBs
NCBI-ProteinID:
ACT91976
UniProt:
C6W1B9
LinkDB
All DBs
Position
complement(840726..844100)
Genome browser
AA seq
1124 aa
AA seq
DB search
MRYFRKILLVMKLTALILTMVCLHVSAASFSQKVSMAVRNKPLAAVFADIQQQTGYQFFY
DNKVVKKGNKVTVDIRSGSIVEVMDAVMKGQPLTYSIIDKTVVIKRKPETGRDTRPESNA
GNAEMKAVLPASQPEKRLETLLLRGPAEYQKADLGITGKVTDDKGEGLPGVSVILKGTQR
GTTSDVDGSFRIDVPDKGSVLIFSFVGYVSKEVTVGPEATLTVTLQTDNRSLEEVVVVGY
GTVKKSDLTGSLSQVKAKELNAYPATNVLQALSGRAAGVQVLQNNGSPGSGVSVRIRGTN
SVNGGNEPLYVVDGFPINGSNPTILNNADIESMEILKDASATAIYGSRGANGVVLITTKQ
GKAGKTRVDFETSYSIQKLRKRLDMMNATEYATFYNEQAANDKLNPYFTQAQIDAMGAGY
DWQDLIFRTAAMKSTALSVSGGNDKTNFSLSGSTFNQDGIIKGSDYNRYSIRANINHTIS
KMFSVNFSGTLSRLVTARKDSEGGGRGTSMISSAIGAPPSLTPYNEDGIYRILATAYPFV
ATDLINPINFINEQNEKTRANVALLNAALVFKPIEDITIKIAGGLENRDDRTDRYTTTRF
VRSNGSASVNTGQFTSFLSENTVSYNKTIADKHSVSAVAGFTYQDFTSTALSASGVGFLS
NTTETYDLRSAATPGIPTSDYSKSVLLSYLARLNYAFDSKYLATVSLRRDGSSKYSEGDK
WGYFPSAALAWRVSNEDFLKNNTVISDLKARASWGLTGSQAISAYATLNQLDAGKTTFGD
ALYSTYTPGTKLPGNLKWETTEQKDFGIDLGLFKNRLIVAVDYYVKNTRDLLNTVTLPAS
LGYTTTIRNIGEVQNKGFELGLDGRILTGAFKWDLNANISLNRNKVLKLNDGQDILGGTV
NVVVINDVTNILREGRPIGQFWGYMEDGYDEKGKIRYQDTDGDGSITIKDKTYIGNPNPD
FIYGINSNMSYKNFDLTFFIQGVSGNDMFNASGMSSTIDYGFGLNMPKEVYQNHWTPSNT
NAKYPLISNSVNARVSNRYIEDGSYLRLKNIQLAYNFPLQKWGVKWISHAQLYASAQNIL
TLTKYSWWDPEVNSRGGSNSIQQGIDFYSYPIAKSVTFGLRVGF
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatttccgtaaaatattattggtgatgaaattgacggccttaatacttacgatg
gtatgccttcatgtatcagcagccagcttttcgcagaaagtcagcatggcggtacggaac
aaaccgctggcggccgtgttcgccgacattcaacagcaaacgggctaccagttcttttac
gacaacaaagtcgtgaaaaaaggcaacaaggtgacagtcgacatccgctcggggtcgatt
gtggaagtgatggatgccgtgatgaaaggccagccgctcacttacagcattatcgacaaa
acggtcgtcatcaaacggaagcccgaaacaggccgtgatacccggccggaaagcaatgca
gggaatgcagaaatgaaagctgtacttccggccagtcaacccgaaaaacggctggaaacg
ctgctgctacgcggcccggccgaataccagaaagccgacctgggcatcaccggcaaggtg
accgacgacaagggcgaaggcctgcccggcgtgagcgtgatcctgaaaggcacccagcgc
ggcaccacgtccgatgtggatgggtcgttccggatagacgtgccggacaagggttcggtg
ctcatattcagctttgtaggctatgtatctaaagaagtgaccgtcggcccggaagcgacg
ctcacggtaacgctccagaccgataaccggagcctggaagaggtcgtagtggtgggctac
ggcaccgtcaaaaagagcgacctgacgggctcgctgtcgcaggtgaaagcaaaggagctg
aacgcctacccggccaccaacgtgttgcaggcactttcgggacgtgccgcaggcgtgcag
gtattgcaaaacaacggctcgccgggaagcggtgtgagcgtgcgcatccgggggaccaat
tcggtgaacgggggcaatgagccgctgtatgtggtggatggcttcccgatcaacggcagc
aaccccacgatcctgaacaatgcggatattgaaagtatggaaatactgaaagacgcgtcg
gccacggccatttacggctcgcgcggcgccaacggcgtggtgctcatcacaaccaaacaa
ggcaaggcaggcaaaacccgcgtcgatttcgagaccagttacagcattcaaaagctgcgc
aaaaggttggacatgatgaatgcgaccgaatacgcaaccttttacaacgagcaagccgcg
aacgacaagctgaacccctatttcacgcaggcgcagatcgacgcgatgggcgcaggctac
gattggcaggacctgattttccgcacggccgccatgaaatcgacagcgctcagtgtgagc
gggggaaacgataaaaccaacttttccttgtcgggaagcaccttcaaccaggatgggatc
atcaaaggaagcgattacaaccggtactccatccgcgcgaatatcaaccatacgatcagc
aagatgttcagcgtcaacttctcgggaacgctgagccggctcgttacggcgcgcaaggac
agcgaaggcggcggccgcggcacatccatgatctcctcggccatcggcgcgccgccgtcg
ctcacgccctacaatgaagacggcatttacagaatcctcgccaccgcctacccgttcgtg
gccacggacctgatcaacccgatcaacttcattaacgaacaaaatgagaagaccagggcc
aacgtggcgctcctgaatgctgccctggtcttcaagcccatcgaggacattactattaaa
atcgccggtggattggagaaccgcgacgaccggacggatagatatacgactacccggttt
gtccggtccaatggctctgcttcggtgaataccggccagtttacgagctttctgagtgaa
aacaccgtgagctataacaagacgattgccgacaagcacagcgtttcggccgtagccggg
ttcacctaccaggacttcacctccaccgcgctgtcggccagcggcgtgggctttttgagc
aataccaccgaaacctacgacctcagatccgcggccacgcccggcattccgacctcggat
tattccaaatccgtgctcctctcctacctggcgaggctgaactacgcattcgacagcaaa
tacctggcgaccgtcagcttgcggcgcgacggttcctccaaatacagcgagggtgataaa
tggggctacttcccgtcggccgcgctcgcctggcgggtttccaatgaggattttctcaaa
aacaacacggttatctccgatctgaaagcccgcgcaagctgggggctgaccggcagccag
gcaatcagcgcgtacgccacgctgaaccagctcgatgccggaaaaaccacattcggcgac
gcgctgtacagcacctacacgcccgggacgaaactgccgggcaacctgaaatgggaaacg
accgaacaaaaggattttgggattgacctcggtttattcaaaaacaggctcattgttgcg
gtcgattattatgtcaaaaacacgagggacctgctcaacaccgtcacgctgcccgcttca
ctcgggtacaccacgacaatccgtaacatcggagaagtacaaaacaagggattcgaactc
gggctggatggccgcattctcacgggtgcattcaagtgggatttgaatgcgaatatttcg
ctgaaccgcaacaaggttttgaaactcaatgacggacaggatatcctcggcggcacggtg
aacgtggtggtgatcaacgacgtgaccaacatcctgcgcgaaggaaggcccatcggacag
ttttggggctacatggaagacgggtacgacgagaagggaaaaatcaggtaccaggatacc
gacggcgacggaagtattaccatcaaggacaaaacctacatcggcaatcctaacccggat
ttcatttacggcatcaactccaatatgtcctacaagaacttcgacctgacgttttttatc
cagggcgtgagtggcaatgatatgttcaatgcaagcggcatgagcagcaccatcgactac
ggatttggcctgaatatgccgaaagaggtttaccagaaccactggacgccttccaacacc
aacgccaaatatccgctgatcagcaacagcgtgaatgcgcgggtatccaaccgctacatc
gaggacggctcctacctgcgcctgaaaaacatccagctggcctacaacttccccctgcaa
aaatggggcgtcaaatggatcagtcatgcgcagctgtacgcaagtgcgcaaaacatcctc
acactcaccaaatactcctggtgggaccccgaagtgaactcgcgcggaggcagtaactcc
atccagcagggcatcgacttttacagctacccgatcgccaagtcagtcacattcggtttg
cgggtcggtttttaa
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