Dyadobacter fermentans: Dfer_0793
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Entry
Dfer_0793 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_0793
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_0793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CooC_C
TTR_TEN1-4
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
ACT92053
UniProt:
C6W280
LinkDB
All DBs
Position
933667..936819
Genome browser
AA seq
1050 aa
AA seq
DB search
MHDCLLNRNALARIAGICGLPVLLLAAAPHDAIAGRAPIADYNSRHRAAPVAEVEITGKV
TGEDGEGLPGASVLVKSTTTGTITDADGNFKLRVADGANAVLVISLVGYVSQEIPVGTQK
VIDVLLKTDNKVLEEVVVVGYGTQRQEAVTGSVVSVSGDIMRQVPSSNLSQALQGRVVGV
EISQTSSKPGSAMQILIRGQRSLRADNNPLIVLDGIPFAGSLTDINPNSIKSLDILKDAS
ATAIYGSRGANGVILITTNTGKRGQKAQFSYNGFHGVTTVFAKYPMMNGPEFAALRAASI
QKFQNTIDESNDVNTDWQDMIYRNGMMTSHDLSVSAGTEKGSYSFGLGYYKENAVVPLQN
FTRYSLQGSVDQDINKYFKVGLSTNSNFTINNGNGVPAVGMALARTPITNPYNADGSMKT
IVQEQTSGPQWVPSRQRFNSLGDAYVDQTKAYGSYNTVFAEIRVPGVTGLKYRANLGLNF
RQSSGGNYTGQGVFSGNVQNVSTAGINNSLTTNWAIENLLSYDKTFKKHIINAVALYSAQ
QNTSSNSSVGARDIPSDAFQFYNLGRADGIITVNPANQGYNQWGLLSYMGRVMYSYDDRY
MLSVTYRADGSSRLASGYQWNAYPAVSAGWNISKENFMSGVTRVNLLKLRAGYGQTSNQA
VNPYETLGLLATRPYNFGDDTYSTGFYVSNAPNPRLGWEFSNTVNFGVDFKLFNNRLSGT
VEYYEQQTKNVLLGVGLPPTSGVGGYTANIGQTENKGIELNLNGTILENVNGWSWDIGFN
IYGNRNKLVSLASGQQRDEGNWWFVGHPINSIFDYEKVGLWQADDQYRDIYEPGGNAGMI
RVKYTGDYNADGAPTRAINASDRQIISMQPDFQGGFNTHVAYKGFDLGIVGAFKSGGLLN
STLYGSGGYLNNLNARSGNNVKVDYWTPENTSAKYPAPGGIGGDNPKYGSTLGYFDASYL
KIRTMTLGYNLDSRQLEKLGITRLRVYFTAQNPFVMFSPYHRESGMDPETNSYGNENAAV
PLSGALRRILTIGTNTPSTRNYLLGVNLTF
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactgtttattaaaccgtaatgcgctggccaggatcgcgggcatttgtggcctg
ccggtattgttgctggcagcagcaccgcatgatgccattgccggacgcgcgccgatcgcc
gactacaacagcaggcaccgggctgcgccggtggccgaagtggagattaccggtaaagtt
accggcgaggacggcgaaggattacccggcgccagtgtgctggttaaatctaccaccact
ggtacaatcaccgacgcggacggtaatttcaaactgcgtgtggccgacggagcaaatgcc
gttttagtcatctccctggtggggtatgtttcccaggaaatcccggttggcacccagaag
gtgatagacgtcctgcttaaaaccgataacaaggttttggaggaagtagtagtggtgggc
tacgggacccagcgccaggaagcagtgacggggtctgtggtttcggtctcgggtgacatt
atgcggcaagttccctcttcgaacctctcgcaggcgttgcaaggccgggtagtgggtgtt
gaaatttcccaaacatcgtcgaaaccaggctcggccatgcagatcctgatcaggggccaa
cgttcactgagggcggataataacccgctgatcgtgctcgacgggataccattcgccggc
tcgctgaccgacatcaacccgaacagcatcaaaagcctggacattctcaaagacgcttcg
gcaacggctatttatggttcaaggggtgccaatggggtgattctgatcacgaccaacacc
ggaaagcgcgggcagaaggcacagttcagctataatggctttcatggggtgactaccgtt
tttgccaaatatcccatgatgaacgggcccgagtttgcggcacttcgcgcggccagcatt
cagaaattccagaatacgatcgacgagtccaacgatgtcaatacggattggcaggatatg
atttaccggaacgggatgatgacaagccatgatctgagtgtttcagcgggtacggagaag
ggcagctattcgttcgggctgggatattacaaggagaatgcggtggtgcctttgcagaac
tttacccgttattcgctgcaagggtctgtggaccaggatatcaacaaatactttaaagtc
ggattgtcgaccaactcgaactttacgatcaacaacggaaacggcgtgccggcagtagga
atggctttggcccgaacgccgatcaccaatccttacaatgccgacggaagcatgaaaacc
atcgttcaggagcagacttccgggccgcaatgggttccttcccggcagcggttcaacagc
ctgggcgatgcctatgtggatcagacgaaggcatacggatcttataacaccgtgtttgcg
gaaatcagggttcccggggtaaccgggcttaaataccgggctaacctgggtcttaatttc
cggcaaagcagcggcgggaattacaccgggcagggggtattcagcggcaatgtccaaaac
gtttcaacggcgggtatcaacaattcacttaccaccaactgggccattgaaaaccttttg
agctacgacaagaccttcaagaagcatattatcaatgcggttgcgctctattccgcccag
cagaatacgtccagcaactcctcggtcggtgcccgtgatattccctcggatgcatttcag
ttctataacctcggacgtgccgacggcattattacggtgaatcccgccaaccagggttac
aatcaatgggggctgctttcctatatgggccgggtgatgtactcctatgacgaccgatac
atgctcagcgtcacttaccgggcagacggctcctcacgacttgcatcgggttaccagtgg
aatgcctatcctgccgtgtccgcgggctggaacatctcgaaagaaaactttatgagcggt
gttacccgggtaaatcttctgaaactgagggccgggtatgggcaaacttccaaccaggcg
gtgaatccgtatgagacgctggggctgctggcgacaaggccctataatttcggcgatgat
acttattcgacgggattctatgtgtccaacgcaccgaacccgcgtctgggatgggagttt
tccaatacagtcaatttcggggttgatttcaagctcttcaacaaccggttgtcgggtacg
gtggaatactacgagcagcaaaccaaaaatgtgctgctgggcgtaggactcccgccgacc
tcgggggtaggaggttataccgccaacatcgggcagaccgagaacaagggcattgagcta
aacctgaatggaacaatcctggaaaacgtcaatggctggtcctgggacatcgggtttaac
atctacggcaaccgcaacaagctggtttcactggcatccggtcagcagcgtgacgaaggc
aactggtggtttgtcggccatcccatcaattcgatctttgactatgaaaaagtagggctc
tggcaggccgatgaccagtaccgggatatttacgaaccgggcggcaatgcgggcatgatc
cgggtcaaatacaccggggactacaatgcggacggagcgccaacacgggcgatcaatgcc
agcgacagacagattatcagcatgcagcctgattttcagggcggattcaatacgcatgtc
gcttataaagggttcgatctgggtattgtgggtgcattcaaaagcgggggcttgctcaat
agcacgctgtacggttcgggagggtatctgaacaacctgaatgcacgctcaggcaacaat
gtcaaagtcgattactggacgccggaaaatacatctgcgaaatatcctgcaccgggcggt
atcggtggcgataaccccaaatacggcagcacgctgggctatttcgatgcctcatacctg
aaaatcaggacaatgacgctgggctataatctggattcgaggcagcttgaaaagctgggg
attaccagactacgggtttatttcacggctcaaaatccctttgtaatgttctctccttac
caccgggaatcgggaatggacccggaaacaaactcctacggaaatgagaatgcggcagtt
ccactgtcgggtgcgctacgacgtatactcacgatcggcacgaataccccttcaacccgg
aactatctgctgggcgttaatctgaccttttaa
DBGET
integrated database retrieval system
