Dyadobacter fermentans: Dfer_1042
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Entry
Dfer_1042 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_1042
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_1042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
MetallophosN
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ACT92291
UniProt:
C6W454
LinkDB
All DBs
Position
complement(1231564..1234740)
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AA seq
1058 aa
AA seq
DB search
MLGQVLVGVAFAGFHEVRASAMPLNEVITVTADRPLSGKVTDENGAGLPGVSVIVKGSST
GTVSDTDGRYSINVPDSGSPILVFSFVGYVPKEITVGNQTNLDVQLAVDNKALEEVVVVG
YGTQRKRDITSAVSNINMEDIGEVPKSNVTRMIQGQAPGVIIKQKSGTPGQQFEVKVRGI
SSLGAGSDPLYVIDGFPVGISVGQNLNPNDIETITVLKDAASTAIYGARGSNGVVLITTK
SAKEGKTNLNVSVDYGIQNVPDARKTKVLNGQDFAQFKKEVFIGRYVLANKRQPTIEEIP
ADFRNPENTQYSTNWFDLILNNNAPYTDVNVSLSSGKGPIKSMVSIGYYKEEGALKYTDY
DRASVRTNLAGDVNKFISMGVNIAGSYSRSSLAATDGRSALVGLTLISDPRYPAYDEKGE
LIPYYNGVGDIFGFPNPLYLLKAISRDRNIADVLANGYIDFNIAKGLKFRTSVNAKINYN
KYKEFVPSTIGLAIATGTNGAPPRIATERDDAEELRNYTADQLLTYNVNFGENHHLDAML
GYTAQQEIVRGLYGSGNTFPDDLAPFLGNATIRSSNSMERKWTMLAYLARLNYSFKDRYL
FSASFRREGSSRFSEGHQFGNFPAVSVGWRLSEEPFIPKAAWLNDLKLRGSWGMTGNNTY
QVSANNNFGTGQNAGDDGNYASLAFLGLNNYVFNNTLAPGKTVTRFANSELTWEKSNQLN
VGLDLTTFNNRLVFTVEYYKKITDDMLLGYSIPAVSGFTSTLKNLGKVQNQGVEIAGSYR
MKIGQVNFRTNANITFNRNKILAIRGQNDFILQGSQYGGYNIQQVGRPIGMIFGYRKLGI
FNTQAEIDAAPLQEGAVPGAMKFADLHGAPDGGPDGIVSYDTKDMTEIGNPNPKFNWGWT
VGADFKRFDVSVLLMGAHKFDIYRNIEASTMNMDGVFNVLEKAKDRWRSPDNPGSNPNAK
NSQGGTDYFKWSRESSERYVYDGSHTWIKNVTIGYTLPKVDGILSDARIFVNLANLLLIT
KYPGNNPDAGVRGGTELNNDDESYPVPRTFSAGIKLNF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgctcggccaggtgttagtcggcgtcgcattcgctggtttccatgaagtcagggcgagt
gctatgccgctgaatgaagtaattacggtcaccgcggaccgccctctgagcggaaaagtg
actgacgaaaatggcgccggccttccgggcgtgagtgtaatcgtgaaaggttccagcacc
ggaactgtgagcgatacggacggccgctactccattaatgtccctgattcgggcagccca
atcttagttttctccttcgtcgggtacgtaccaaaagagattacagtgggaaatcagacg
aatttggacgttcaattagctgtggacaacaaagcattggaagaagtggtggtagtgggt
tacggcacccagcgcaagcgcgacatcacttcggcagtatccaacattaatatggaggat
atcggggaagttcctaagtcgaatgttacccgaatgatccagggccaggcgccgggggtg
atcatcaaacaaaagagcgggaccccgggccagcagtttgaagtaaaggtgcgcgggatc
agttcgcttggcgcaggcagcgacccgttgtatgtaatcgacggctttcctgttggtata
tcggtcggacaaaacctcaaccccaacgacatcgagacgatcaccgtcctgaaagatgcc
gcatccacggccatttatggtgcacgcggttccaacggggtggttctgatcacgaccaaa
tcggccaaagaaggaaaaacaaatcttaatgtgtcagtcgattacggaattcagaatgtg
cccgacgcccgcaaaaccaaagtgctgaatggccaggacttcgcgcagtttaagaaggaa
gtttttatcggccggtacgtactggctaacaagcggcagcctaccattgaggagatcccc
gctgacttccgcaaccctgaaaacacccagtattccaccaactggtttgacctcatcctg
aacaacaatgcgccttataccgatgtgaatgtatcgttatcatccggaaaagggcccatc
aaatcaatggtatccattggttactacaaggaggaaggtgcattgaaatacacggattac
gaccgtgcgtccgttcgcacgaacctggcaggcgacgtcaacaaattcatttcgatgggt
gtcaatatcgcaggtagctactcacggtcgagcctcgcggctacggacggccggagcgcg
ctggtgggtttgacgctcatcagcgacccgcggtatccggcttacgacgaaaagggtgaa
ttgatcccgtactacaatggcgtgggtgatattttcggttttcccaatccattgtacttg
ctgaaagcgataagccgcgaccgcaacatcgccgacgtactcgcgaatggctacattgat
ttcaacattgccaaaggcctgaaattcaggacgtcggtgaatgcgaagatcaattataac
aaatacaaggagttcgttccttccacgatcggtctggctattgcaacgggcaccaacggc
gcgccgccacggattgcaaccgagcgtgacgatgcggaagagctgcgtaactacacggcg
gaccagttgcttacatacaatgtcaatttcggcgaaaaccaccatctcgatgccatgctc
ggctacaccgctcagcaggagatcgtgagaggtttgtacggctccggtaacacattcccc
gatgacctcgctccgttcctcggcaatgcgaccatccgttcgtccaactcgatggagcgc
aaatggactatgcttgcctacctggcacgtttgaactactcattcaaagatcgttacctg
ttctcggcatcattccgccgcgagggcagctcccgtttcagcgaagggcatcagttcggc
aacttcccggcggtttcggtgggttggaggctttcggaggaaccgtttatccccaaagca
gcctggcttaacgacttgaaactacgcggtagctggggtatgacgggtaacaacacctat
caggtaagtgccaacaacaactttggtacgggacaaaatgcaggcgacgatggcaactat
gccagcctcgcgttcctaggtttgaacaactacgttttcaacaacacgctggcgcccgga
aagacggtgacacgttttgccaattctgaactgacctgggaaaagtccaatcagctcaac
gtcggtttggacctgaccacattcaataaccggcttgttttcacggtggagtattacaaa
aagatcaccgacgacatgttgctcgggtacagcattccagccgtttcaggctttacttct
accttgaaaaacctgggtaaggttcagaaccagggagttgagatcgccggtagctaccgc
atgaaaatcggacaggtgaatttccgtaccaatgcaaacattactttcaaccgcaacaaa
atcctggcgatccgcggacaaaacgactttatcctgcaaggaagccagtatggcggctat
aacattcagcaggtgggacggcccatcgggatgatcttcggataccgcaagctgggtatc
ttcaacacccaggccgagatcgacgccgcaccgctgcaggaaggcgctgtgccgggagcc
atgaaattcgccgatttgcacggagcgcccgacggcggcccggatggcattgtgtcgtat
gataccaaagacatgaccgaaatcggtaaccctaacccgaaattcaactggggctggacc
gtgggagcggacttcaaacgctttgatgtgagcgtgttgctgatgggcgcccacaagttc
gatatctaccggaacattgaggcttcgaccatgaacatggacggcgttttcaacgtgctc
gaaaaagcgaaagaccgctggcgctcgccggataacccgggttctaaccccaatgcgaaa
aactctcaaggcggaacggattatttcaaatggtcacgcgagagcagcgaacgctatgtt
tacgatggcagccacacctggatcaagaacgtgacgatcggatatacactgcccaaagtg
gatggaatcctgtcggacgcacgcatcttcgtcaacctggccaacctgttgctgatcacg
aaatatccgggtaacaaccccgacgccggcgtaagaggcggaacggagctgaacaacgac
gatgagtcgtaccccgttccgagaacattctccgcgggtattaaacttaacttctaa
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