Dyadobacter fermentans: Dfer_1064
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Entry
Dfer_1064 CDS
T00970
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dfer_1064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfe03400
]
Dfer_1064
Enzymes [BR:
dfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Dfer_1064
DNA repair and recombination proteins [BR:
dfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dfer_1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
McpB_HAMP_1st
Motif
Other DBs
NCBI-ProteinID:
ACT92313
UniProt:
C6W476
LinkDB
All DBs
Position
complement(1261003..1261905)
Genome browser
AA seq
300 aa
AA seq
DB search
MDQQTILIPNPPLFSFRECHWFLDRDFDDCMHTIRGNAVLKAIRTSFGDILFRVSEEANF
LKTEILYGAAAPEARDLVVGYVANWFDLNRDIEPFYDLLAADSRLAYMTDAFRGLRLVGI
SDMFEAICWSIIGQQINLTFAYKLKRRMVERYGTHVEWNGEVFPVFPTPEALANAGIDEL
RAMQFSQKKAEYVVGIAQAFADGKLNAEVISALPDFASRQKVLVAYKGVGIWTANYVLMK
TFRMPEGIPHGDVGLLNALAGHGIIGDRSEKEKIEALFHAFPGWETYLTFYLWRSLAMKR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaaactattcttatcccgaatccgccgctgttcagtttccgcgaatgccac
tggtttctcgaccgcgattttgacgattgcatgcacaccattcgcggcaatgcggttctg
aaagcaatccggacgtcgtttggcgatatcctgtttcgggtgagtgaagaagctaatttc
ctgaaaaccgagattttgtacggagccgcagcccccgaagcgcgtgacctcgttgtcggt
tacgtggccaactggttcgacctgaaccgtgatatcgagccgttttacgaccttttggca
gccgattcccgcctcgcttacatgaccgacgccttccggggtttacgattggtcggcatt
tcggacatgttcgaagcgatttgctggtccattatcggtcagcaaatcaacctcacattc
gcgtacaagctgaaacggcggatggtggaacgctacggcacgcacgtggagtggaacggc
gaggtcttcccggtttttccaacccccgaggcgctggccaatgccggcatcgacgagctg
cgtgccatgcaattttctcaaaaaaaggcggaatacgtggtaggcattgcacaagcattc
gccgatggaaaactgaatgcggaagtgatcagcgcattacccgatttcgcgtcgcggcaa
aaagtgctggttgcgtacaagggtgtgggtatctggacggccaattatgtgctcatgaaa
acgttccgcatgcccgaaggcattccgcacggcgatgtaggcctgctaaatgcgctcgct
gggcatggtatcattggggatcggagtgagaaggaaaaaattgaggcgctcttccatgca
tttcccggctgggaaacttacctgacattctatttatggcgcagcctcgctatgaaacgt
tag
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