Dyadobacter fermentans: Dfer_1085
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Entry
Dfer_1085 CDS
T00970
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Dfer_1085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
Spt6_S1
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ACT92334
UniProt:
C6W497
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All DBs
Position
complement(1282796..1284913)
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AA seq
705 aa
AA seq
DB search
MNYTLIAQQAGVSDKQARNTIALFEEGATVPFIARYRKEATGGLDEVQIGNVRDAWQKQQ
EVEKRREAILKSIGEQGKLTPDLKKKIEAVFSLTELEDLYLPYKQKRKTRATIAIEKGLE
PLAKLIFEGKERDPEGKAASFLNDQVANAADALQGARDIIAEWINENQEARTKIRYTFQK
GAVITSKVKKKKEEEGAKYRDYFEFSEPLAKIPSHRLLALRRGEEEGILSVDISPDEDSA
LEALDRLFMFGTEACKDQLELAIGDSYKRLLKPSIETEFANLSKEKADVAAIQVFSENLR
QLLLASPLGQKTVLAIDPGYRTGCKVVVLDGQGNLMADHVIYPFDKPADAAARISELIRK
HKVEAIAVGNGTAGRETEDFVKKLLDGSEKSSEIGLFMVSEQGASIYSASEVAREEFPDK
DVTVRGSVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNSLRNALDIVVESCVNSVGV
NLNTSSKHLLRYVSGLGPALAQNIVDFRAKNGNFKSRQQLLKVPRLGAKAFEQAAGFLRI
ENGANPLDNSAVHPERYALVEQMAKDAGSTVKDLMQKAELRRQVRIEKYVSESVGLPTLK
DILAELEKPSRDPRAEIKKFEFDSSVRKPEDLKVGMVLPGIVTNITAFGAFVDVGVKQDG
LVHVSQMAEKFVKDPNEVVKLQQHVTVKVTEVDLARKRIALSMKL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaccctaattgcacaacaggccggcgtgagcgacaagcaagcgcggaatacc
attgcgctgttcgaagaaggcgccacggtgccgtttatcgcccggtatcggaaggaagcg
accggcgggctcgacgaggtacagatcggcaacgtccgggacgcctggcagaagcagcag
gaagtcgagaaacggcgtgaggctattttgaagagtatcggggagcaggggaaactcact
cccgatctgaaaaagaagattgaagccgttttttcactgactgagctcgaagacctttac
ttgccctataaacagaaaagaaagacccgcgcaaccattgccattgaaaagggtctggaa
ccgcttgcaaagctgatttttgaaggaaaagagcgcgatccggaaggcaaggcagcatcg
ttcctgaatgatcaggtggccaatgcggccgatgcattgcagggcgcgagggatattatc
gccgaatggatcaacgagaatcaggaagcgcggacgaagatccggtatacttttcagaag
ggggcggtcatcacgtcgaaagtcaaaaagaaaaaagaggaggaaggggccaaataccgc
gattatttcgagttttcggagcctttggccaaaataccttcccacaggctgctggcattg
cgccggggcgaggaagagggaatcctgagcgtggatatttcgccggacgaggactcggcg
ctcgaagcgctggaccggctatttatgtttgggacggaggcctgtaaagaccagctcgaa
ctcgcgattggcgatagttacaagcggttgctgaaaccgtccattgaaacggagtttgcc
aatttgtccaaggaaaaagccgacgtggccgcgatccaggtcttctcggaaaacctgcgg
cagctgctgctcgcatcgccattaggccagaaaaccgtgctggcgatcgacccgggctac
cgcacgggctgcaaagtagtggtgctcgatggccaaggcaacctcatggccgaccacgtc
atttatcctttcgacaagccggctgatgccgccgcacgtatcagcgagctcatccgtaag
cacaaggtggaggccatcgccgtcggtaatggaacggctgggcgcgagacggaggatttt
gtaaagaagctgctcgacggttcggaaaaatcttcggaaatcgggcttttcatggtgagc
gagcagggcgcgtccatctactcggcgtcggaagtggcgcgggaggaattccccgataag
gatgttaccgttcgcggctctgtgtcgatcgggcgcaggcttatggacccgcttgcggag
ctcgtgaagatcgatccgaaatccattggtgtaggccagtaccagcacgatgttgatcag
aattcattgcgaaatgctttggatatagtcgtagaaagctgcgtgaattccgtaggcgta
aatctcaacacgtcgagcaagcatttgctgcgctatgtttcgggccttgggcccgctttg
gcgcagaatatcgtggattttcgggctaaaaacggaaatttcaaatcacgccagcaatta
ttgaaagtgccgcgcctcggggccaaggctttcgagcaggccgcaggcttcctgcgtatt
gaaaatggagctaatccattggataacagcgcagtacacccggagcgatatgccctcgta
gagcaaatggcgaaggatgcaggcagtactgtgaaggatctgatgcagaaagccgagctg
aggcggcaggtcaggatcgaaaagtatgtttcggagtcggtggggttgcctacgttaaag
gacatcctggccgagttggaaaaaccgtcgcgtgacccgcgcgcggaaatcaagaagttt
gagttcgacagttccgtccggaagcccgaggacctgaaagtcggaatggtgctcccgggc
atcgtcaccaacatcacagccttcggcgcgtttgtcgatgtgggcgtgaagcaggacggc
ctggtgcacgtgtcacaaatggccgagaagtttgtgaaagatccgaacgaagtcgtgaag
ttgcagcagcacgtgaccgtgaaagtcaccgaggtagacctcgccaggaagcggatcgca
ttgtcgatgaaactttga
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