KEGG   Dyadobacter fermentans: Dfer_1246
Entry
Dfer_1246         CDS       T00970                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dfe  Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfe03016]
    Dfer_1246
Enzymes [BR:dfe01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Dfer_1246
Transfer RNA biogenesis [BR:dfe03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Dfer_1246
 Prokaryotic type
    Dfer_1246
SSDB
Motif
Pfam: TruB_N TruB_C_2 Etd1 HerA_C
Other DBs
NCBI-ProteinID: ACT92495
UniProt: C6W615
LinkDB
Position
1476364..1477098
AA seq 244 aa
MVGRSPLISPDLKQEENIPDEGEVILIDKPLTWTSFDVANKLKRACKFKKIGHAGTLDPL
ATGLLILCTGKKTKQIDNFQAQEKEYTGTLVLGKTTPSIDLESDFDAEYPTDHITPEVLE
NARQQLTGHIEQVPPLFSAIKIDGVRAYKLARRGEEAEIKKRAVEIKLFEIDATHFPSID
FRIICSKGTYIRSMVRDFGVLAGSGAYMSKLCRTRIGDFELKDAWELTAFIHQKRVALNL
EVDE
NT seq 735 nt   +upstreamnt  +downstreamnt
atggtcggccgatcgccattaatctcccctgatttgaaacaagaagaaaacataccggac
gaaggtgaggtcattctgatcgacaaacccttgacatggacttcgttcgacgtggccaat
aagctgaaacgggcctgcaaattcaagaaaatcggtcacgccggcaccttggacccgctc
gctaccggcttgctcatcctttgtacgggtaaaaaaaccaagcagatcgacaacttccag
gcgcaggaaaaagaatacaccggcacgctggtattgggcaaaacgacgccttcgatcgac
ctggaaagcgacttcgacgccgaatatcccaccgaccacattacgccggaggtgctcgaa
aatgcgagacagcagctcaccggccacattgagcaggtcccgccgctattttcggccatt
aaaatcgacggcgtgcgtgcgtacaagctcgcgcgacgcggcgaggaggcggagatcaag
aagcgggcggtggaaatcaaactgttcgaaatcgacgctacccactttccttccattgat
tttaggatcatttgttcaaaaggtacttatattcgcagtatggttcgcgatttcggtgtg
ctggccggcagcggggcttacatgagcaagctctgccgcaccaggatcggcgattttgaa
ctgaaagatgcctgggagctcaccgctttcatccatcagaaaagagtagcgttgaatttg
gaagttgacgaatga

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