Dyadobacter fermentans: Dfer_1438
Help
Entry
Dfer_1438 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_1438
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
ACT92684
UniProt:
C6W775
LinkDB
All DBs
Position
1702521..1705520
Genome browser
AA seq
999 aa
AA seq
DB search
MKRPLSRLIRELHRICLLVAAVACFLTENALALAADRQISGKVVSAEDKNPLPGVTIIVK
GKNTVGTATDTDGKFKLEVPEGATLILSYIGYISQEVPVGNQSEVNVELAPDQKQLQEVV
VIGYGTQKKGDITSSVASIKREDFVQGTVRDAAQLVQGKVAGLRITTPSGSPTSNTQINL
RGINSIEGTANPLILIDGIPGGLNTVAPEDIESVDVLKDGSAAAIYGTRATGGVILITTR
KNRGTSRSTIEYSNYVNIQSIARRPELLTGDDYRQKIKEGIDYTDYGGNTDWLSEIMQKP
VSHNHNLTFFGGNSTTNFTGSVNYRNWEGIFLRSGQNRFTGRADLNHSMFNNKLKTNLQL
INRITRSNGAVSPANDDAAYGYAYRQAIIRNPTDKVIGDNGKWQERDGYFYENPVSLLNE
SNFNSSFKEMRMAGSLDYAPIDDLNFKLLVSNVQNSNLEGGSTTFNHTSTRLGNQNGTAF
RNTYANNENLLELTGNYSKTIGKHRFSVLGGYSWQDATYEAFAASNWDFPTDAYDWNNLG
AGGALQKGQAAMSSTKNKWQLAGFFGRVTYSLSDKYLFMASVRREGSSRFGVNNQWGTFP
AASIGWRISKENFMGGLGAASDIKLRAGIGVTGTIANNPYMSQISYNFDRAQGAFIGGKW
VPGFVPARNFNPDLRWEKKEEYNAGVDFGFLKNRINGSIDFYSRKVKDLLYNFPVPVPPY
LTGSMFINAGVMENKGLEVLLNIVPIQTGDFQWNTGLTYSTNRNKLVSLSNEQFQAANDF
FDAGYTGEPIQVSTHRVKVGEPIGRFFVWKSVGVDDKGAWLVENKEGEVIPIADATPEDR
QYYGNGIPKHILGWNNNIRYKQFDLAVNMRGAFGFDILNFQNMFYGNPRNKAYNMLKTAY
DPIDGKVLTSDLVYVSHYIEKGDYWKVDNVTLGYTLPANTIKGLKNARIFVSGLNLATIT
GYTGIDPEGVSFTGFSPGSDYRDKYPTTRTFTAGLSVTF
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaccattatcccgcctgatccgagaactgcaccgcatttgcctgctcgtagcg
gcggtggcctgtttcctgaccgaaaatgccctggcgctcgccgccgaccgacagatctcc
ggcaaagtggtgtccgccgaggacaaaaacccgctgcccggcgtgaccatcatcgtgaag
ggaaagaataccgttggtacagccactgataccgatggaaaatttaaactggaagtgccc
gaaggagcgacgcttatcctcagctacatcggctacatcagccaggaagtgcccgtgggc
aaccagagcgaagtgaatgtagagctggcgcccgatcagaaacagttgcaggaagtggtc
gtgattggatatggtacccagaaaaaaggcgacattaccagttctgtggcgagcatcaag
cgcgaagatttcgttcagggaacggtacgcgatgcggcccagctcgtgcagggcaaagtg
gccggcttgcgcattaccacgcccagcggctcccccacttccaacacgcagattaatttg
cgggggattaattccattgagggaacggcaaacccgctcatcctgatcgatggcatcccc
ggcggcctgaacaccgtcgcgccggaagacatcgagtccgtagatgtgttgaaggacggt
tcagcggcggccatttatggtacccgggcaacgggcggcgtgattttgatcaccacccgc
aagaaccgcggcacttcgcgatctaccatcgagtattccaattatgtcaatatccaatcc
atcgcgcgtcgccccgagctgcttaccggtgacgattaccggcagaaaatcaaggaagga
atcgactacaccgactatggcggcaataccgactggctttccgagatcatgcaaaagccc
gtgagccacaaccataacctgacgtttttcggcgggaacagtaccaccaacttcactggc
tcggtgaattaccgcaactgggaagggatctttctgaggtccgggcaaaaccgcttcacc
ggccgcgcggatttgaaccattcgatgtttaacaacaaactgaaaaccaatttgcagctc
atcaaccgcattacccgttccaacggtgcggtgagcccggctaacgacgacgcggcttat
ggctacgcctaccgccaggcgatcatccgcaaccctactgataaagtaatcggcgacaat
ggtaaatggcaggagcgcgacggctatttctacgaaaacccggtttcgttgctcaacgag
tcgaacttcaacagctcattcaaagaaatgcggatggccggtagcctcgattacgcgccg
atcgacgacctgaacttcaaattactggtttccaatgtacaaaacagcaacctcgaaggt
ggctccacgacattcaaccacaccagcacgcgcctgggtaaccagaacggcacagcgttc
cgcaacacctatgccaacaatgaaaacctgctggaattgaccggaaattattccaaaacg
atcggtaaacaccgcttttcggtactcggcgggtatagctggcaggacgctacctatgag
gcatttgcagccagcaactgggatttcccgaccgatgcctacgattggaacaacctcggc
gcgggtggcgcattgcaaaaaggacaggcagcgatgagcagcaccaaaaacaaatggcag
ctggccggcttcttcggaagggttacttacagcctgagcgacaagtacttattcatggca
agcgtgcgccgcgagggttcttcccgattcggggtcaataaccaatggggtacattcccg
gcggcgtccatcggctggcgcatcagcaaggaaaacttcatgggcggcctgggcgcggcc
tcggacatcaaactccgcgcggggataggcgtaacgggcacgatcgcgaataacccgtat
atgtcgcagatcagctacaatttcgaccgggcgcagggtgcattcatcggcggtaaatgg
gtaccgggctttgtgccggcacgtaacttcaaccccgatctccgctgggagaagaaagag
gaatacaatgcgggtgtagattttggtttcctgaaaaaccgcatcaacgggtcgatcgac
ttttacagccggaaggtgaaagaccttctctataatttccctgtgccggttcccccctat
ctaacgggcagcatgtttatcaatgccggggtaatggagaacaaaggcctggaagtattg
ctgaacatcgtgccgatccagaccggcgatttccagtggaacaccggtttgacctactct
accaaccgcaacaagctcgtgagcctctcgaacgaacaattccaggccgcaaacgacttc
ttcgacgcgggatatacgggtgagccgatccaggtgagcacgcaccgcgtgaaagtgggc
gagccgatcggccggttcttcgtatggaagagcgtgggcgtggacgacaagggcgcgtgg
ctcgtcgaaaacaaggagggcgaggtgatccccatcgccgatgctacgccggaagaccgc
cagtattatggtaatggtattccaaaacacattctgggctggaacaacaacatccgctac
aagcagtttgacctcgctgtgaacatgcgcggcgcattcggatttgacattctcaacttc
cagaatatgttttacggcaacccgcgcaacaaggcctacaatatgctcaaaacggcctac
gacccgatcgacggcaaagtgctgaccagcgacctcgtgtacgtgtcgcattatatcgaa
aagggagattactggaaggtcgacaatgtgacgctcggctacacgctgcctgccaatacg
atcaaaggccttaaaaatgcacgcattttcgtgtcgggccttaacctggcgaccattacc
ggctacaccggcatcgacccggagggcgtcagcttcaccggcttctcgcccggcagtgac
taccgcgacaagtaccctaccacccggacattcaccgccggcctgagcgtaacattctga
DBGET
integrated database retrieval system
