Dyadobacter fermentans: Dfer_2207
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Entry
Dfer_2207 CDS
T00970
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_2207
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_2207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
STN
TTR_TEN1-4
MetallophosN
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ACT93429
UniProt:
C6VYS4
LinkDB
All DBs
Position
2701653..2705138
Genome browser
AA seq
1161 aa
AA seq
DB search
MKKNRYRKNRASLCLLMRITLAQLIFSIVFSGLTYAAHVSKAQEVLERNVTLHADKVELA
TVLDQLEQKANVRFVYSNKAIRASRPVAIHVVNQKLSAALQQLLTPLQISYQVTPSGRIL
LKASKELQTKSAGQLQIQMRDMAALVLKGKVSDENGDGLPGVSVRLKGTQLGTLTDASGN
YELEVNNVEPVLVFSFVGYKTQEVAVGDQAVVNVSMTPDFKSLNEVVVIGYGSSRKQDVV
GSVDIVSSKDAGANTATNPSQLLIGKSAGVQVLQSNGTPGADAQILIRGTGSFTGVDPLY
VIDGIQGSKTMFNTLATQDIENITILKDASSTAIYGSAAANGVVIITTRRGKSGAPRINF
NTQWGVAKAWKTLDLLNAAQYVDLLKDFAATTNSALPAKFNTPDVTTDRTDWQKEIFRPA
LVSQNDLNISGGGEKVSYNFSISYIKQQAIVKNFANSRVNARFALDETLGRFRLGQSLNI
RYTKDDGQIASISDAVYYAPYKPIYDPTIPGGYSNTTNVDDFSNGNNPLAAINLNRPVNT
GFVFFPQFFAEVDILGGLRFRTQFSAEIGGGKSRGYQYGYTAGNNLTNPQQATLGFSNYS
FYTLENYFSYNKVFGRHSVSATLGNSYLDPGNSSGLNATGTRIPNDAIQNISVAQSQAVT
GSNYGYARSSVISYFARLGYTYADKYILTGSFRRDGASNFGANNRFGNFYGLGLAWRFVD
EDFIKNNLAFLSDGKLRLGIGRTGNNTIPTTGVTSVLTYSGSPNGNLVYSLGTNEGFYPG
TTINTLSNPDIRWESTDQTDIGLDLGFLSNRLNVTVDWYNRKSSGLLVSVPVSGSTGASG
SGGQPSKYANAASAQNKGVEFSVGYRDQARGGFQYNVSANVAYNKNIVNSLGSEFAAPIQ
AGAFSNLPTFTYTAAGSAIGSFFGYEVSHVAKDQAEIDALNKSAAEQSGDAATKYQAGLL
PGDFIFKDLDGDGKVTSTDQKILGNPIPKIVYGFNAGASYKGFDLNLVVSGVSGLKILNA
FKFVTDNESTGHNASTEILKRWRKPGDVAELPRAGQSATGDGNLRPSDWWLESGAYLRVR
NLTVGYTLPQSVISGIGGGKIFNTIRIYAAAQNLLTFTKYKGYDPEVSTQNGGSYIFSRG
IDDRQQLPQPRTLLCGLQLGF
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaccgataccgaaaaaaccgggcgtcgctttgcttgctcatgagaatcact
ttggcccagctcatcttttcgattgttttctccggcctcacctacgccgcgcacgtcagt
aaagcgcaggaagtactggaacggaacgtcacgctccatgccgacaaggtggagctggca
acggtcctcgaccagttggagcagaaagcgaacgtcaggttcgtatacagcaacaaggcc
atccgggcatcgcggccggtggcgatccatgttgtcaaccaaaaattgtcggccgcattg
cagcagctgctcacaccattgcagatttcctaccaggtgacaccttcgggacgtatactg
ctcaaagccagtaaggaacttcaaaccaaaagtgcaggacaactccagattcaaatgagg
gacatggcggcgctggtgctgaaaggaaaagtaagcgacgaaaatggcgacggcctcccg
ggcgtgagtgtacgcctgaaaggcacgcagctcggtacgctcacggacgcttccgggaat
tacgaactggaagtgaacaatgtggaaccggtgctggtgttcagcttcgtaggttataaa
acgcaggaagttgccgtaggcgaccaggctgtggtgaatgtatcgatgacccccgatttc
aaatcgctcaacgaggtggtggtgatcggctacggtagttcgcggaagcaggatgtggtg
ggctcggtggacattgtttcctctaaagatgccggtgcaaacaccgctaccaacccttcg
caactgctgatcggcaagtcggccggcgtgcaggtgctgcaatccaacggcacacccggc
gcggacgcccagatccttatccgcggtaccggctcgttcacgggtgtggacccgctctac
gtgatcgacggtatccagggcagcaaaacgatgttcaacaccctggcgacccaggatatc
gaaaacattacgatcctgaaagatgcttcatccaccgccatttacggctctgccgcggcg
aacggcgtggtgatcatcaccacccggaggggcaaatcgggcgcgccgcgtattaatttc
aatacccaatggggtgttgccaaagcatggaaaacgctggaccttctcaatgcggcgcaa
tatgtggacctgctgaaagatttcgcggctacgaccaattccgcattgcccgccaaattc
aacacgcctgacgtcaccaccgaccgcaccgactggcagaaagaaatattccggcccgcc
ctggtttcgcaaaacgatttgaatatcagcggaggcggtgaaaaagtgtcctacaacttt
tcgatcagctatattaaacagcaggccattgtgaaaaacttcgccaacagccgggtaaat
gcccgttttgcactggacgaaacgctgggccgcttccggttgggacaaagcctgaacatc
cgctacacgaaggacgatggccagatcgccagcatttccgacgcggtgtactatgcgccc
tacaagcccatttacgatcccacgatccccggcggctactccaacacgaccaatgtggac
gatttcagcaatggtaacaacccgctggcggccattaacctgaaccgcccggtaaacacc
ggcttcgtgttcttcccgcagttttttgccgaagtggatattctcggcgggctgcgtttc
cgtacgcagttttcggccgagatcggcggcggcaaaagccgtggctaccagtacggctac
acggcgggcaacaacctgaccaatccgcagcaggctaccctcggtttcagcaactattcg
ttttacacgctcgaaaactacttttcctataataaggtatttggaagacacagcgtttcg
gcaaccctcggtaacagctacctcgatccgggcaactcgtccggcctgaatgcgaccggt
actagaattcccaacgacgccattcagaacatcagcgtggcgcaatcgcaggcggttacc
ggctcgaactatggctatgcacgctcgtcggtgatctcgtatttcgctcgcctcggttat
acttatgccgataaatacattctgacgggaagcttccgccgcgatggtgcctccaacttt
ggtgccaacaaccggttcgggaatttctacggtctgggcctggcgtggcggtttgtggat
gaggattttatcaaaaacaaccttgctttcctgagcgacggcaagctgcggctggggatc
ggaagaaccgggaacaataccattcccaccaccggcgtaacatccgtactcacttacagc
ggcagccccaacggcaacctggtgtattcactgggtaccaacgaaggcttctacccaggc
acgacgatcaacaccttgtccaatcccgacatccgctgggaatcgaccgaccagacggac
attggcctcgacctggggttcctcagcaaccgcctgaatgtgactgttgactggtacaac
cgcaaaagctccggcctgctcgtaagtgtcccggtttcgggcagcacgggcgcatcgggc
agcggtggccagcccagcaaatacgccaatgcggccagcgctcaaaacaagggcgtagag
ttttcggtcggctatcgcgaccaggcccgtggaggttttcaatataatgtaagtgcgaac
gtggcttacaacaaaaacatcgtcaactcgctgggaagtgaatttgcggcgcctatccag
gccggggcattcagtaatctgcccacatttacctacacggcagcgggatcggccatcggt
tcgttctttggctacgaggtatcccacgtcgcaaaagatcaggcggagatagatgcattg
aacaaaagcgctgccgaacaaagcggcgacgccgccaccaaataccaggcgggcttgctg
ccgggcgacttcatattcaaagatctcgacggcgacggcaaagtaacctccaccgaccag
aaaatcctcggcaacccgattccgaaaatcgtgtacggcttcaatgccggtgccagttac
aagggctttgatctgaacctcgtcgtatcgggcgtatcgggtttgaaaatcctgaatgca
ttcaaattcgtgaccgacaatgaatccacagggcacaatgcttctaccgaaatcctgaaa
agatggcgtaagccgggcgatgtcgccgaacttccgcgtgcaggccagagcgctaccggc
gacggtaacctccgcccttccgactggtggctcgaaagcggcgcttacctgcgcgtacgc
aacctcacggtgggctacaccctaccccagagcgtgatcagcggcattggcggcggcaaa
attttcaataccatcagaatctacgccgcggcccaaaacctgctgacgttcaccaagtac
aaaggctacgaccccgaagtaagcacccagaacggcggaagctacattttctcgcggggt
atcgacgaccgccagcagctgcctcagcccagaacattgctttgcggcttacagctcggg
ttttaa
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