Dyadobacter fermentans: Dfer_2218
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Entry
Dfer_2218 CDS
T00970
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_2218
Transporters [BR:
dfe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Dfer_2218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
HP1451_C
Motif
Other DBs
NCBI-ProteinID:
ACT93440
UniProt:
C6VYT5
LinkDB
All DBs
Position
complement(2717016..2718716)
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AA seq
566 aa
AA seq
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MKRYISFLLTLCALGLTTGCEESYLEEVPLDRFSPENLLVNEAGYDAAVVSLYEAARQEH
SIASNNFEYMTVGTDQSQWGRNDSRGNKDYSLLNSNLEATAIYWDWAFKQMIVRANLILD
NIDDPELKIGDAARANIKGQALFFRAYTYNFLANVYGGVPVVKERIEEPRFDFVRNTRME
VLEFVAQDLEAASTLLNMEVPDGRIPRAAAFHLLSEVYISLGMEKKDESWFDKSIAAATK
VISKEAGDYQLMTQRFGKAGAKPGDVFSDIFADGQINRSSGNKEVMWAWQFENFTPGGYS
TPTLANISIRYWGPEYDKIQSPNGTANLPSDSLGRGIGVNSPTNYIKYDIWKLDPNDIRN
SVHNIRRTFYYNNAADKEYFGKPIVAKRGADGQLYTTKSDGSLTKFVLDTLRQYYPYIRK
IEGTPMGNNNLSGNSVKDFSRMRVAETYLLRAEAHFRKGDLAMAAADLNIVRARANAKPI
AAAAVTEDFILDERSRELIVEEPRLRTLIRMGRLVDRVRKYNSIPSVPNGPSSGGTIQDF
NRYWPIPQKVIDANTGATFEQNPGYP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatacatttcctttttgctgaccctgtgtgcgctcgggctgacgaccggttgc
gaagagtcttacctggaagaagtgccgctcgaccgtttcagtcccgaaaacctgctcgtg
aacgaagcggggtacgatgcggcggtagtgtcgctctacgaagctgcccggcaggaacac
agtatagcgtccaacaatttcgaatacatgaccgtaggcacggaccaaagccagtggggc
cgtaacgattcgcggggtaacaaggattacagcctgctgaactcgaaccttgaggccacg
gctatttactgggattgggcattcaagcagatgatcgtccgtgctaacctcatcctggac
aacatcgacgatcctgaactgaaaataggcgatgcggcccgcgccaacatcaagggacag
gccttgtttttcagggcatatacctacaatttccttgcaaatgtgtacggaggcgtgcct
gttgtgaaagagcggatcgaggagccgaggttcgatttcgtgcgcaatacgcggatggag
gttttggaattcgtggcgcaggatctggaagcggcttccacattgctgaatatggaagtg
cccgacgggagaatcccgcgcgcggcggcatttcacctgctgagcgaggtttatatttca
ctgggtatggaaaagaaggacgaatcgtggttcgataaatccattgccgcggccacaaag
gtgatcagcaaggaagccggtgattaccagcttatgacgcagcgtttcggcaaggcgggc
gcaaagcccggggacgtgttttccgacatttttgccgatgggcagatcaacagatcgtcg
gggaacaaagaagtaatgtgggcctggcaattcgaaaatttcacgccaggcggctattcc
actcccacactggccaatatcagcatccgctactgggggccggaatatgacaagatccaa
tcgcccaacggcacggccaacctgccgtccgacagcctcgggcgcggcatcggcgtcaat
tcgcccaccaattacatcaaatacgacatctggaagctcgatccgaatgatatacgcaac
tcggtgcacaatatccgcaggaccttttattacaacaacgcggcggacaaggaatatttc
ggcaaacccattgtggccaaaaggggcgcggacggccagctttacaccaccaaatcagat
ggctcactgaccaaattcgtgcttgatacattgcgccaatattatccctatatccgaaaa
atcgagggtacgcccatgggtaacaacaacctgagcggcaattcggtgaaggatttcagc
cggatgcgcgtcgcagagacctatttgctgcgtgccgaagcgcattttagaaaaggcgac
ctggccatggccgccgcggacctgaatattgtccgcgcacgggctaatgcaaagccgatc
gccgccgccgccgtgaccgaagactttatcctcgacgaacgctcgcgtgagctgatcgtg
gaagagccccgccttcgcacgctcattcgcatgggcaggctcgtagacagggtgcgcaag
tacaattccataccctccgtgccgaacggaccgtcgtcgggaggcaccatccaggatttc
aaccgctactggcctatcccacagaaggtgatcgatgccaacaccggtgccacgttcgaa
cagaatcccggttacccttga
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